NS003
A tour of open-source software packages for the geosciences
Session ID#: 78079
Session Description:
This session will be a rapid-fire tour (5 min) of open source tools freely available for researchers in the geosciences. The fast-growing open source software ecosystem is creating new tools and changing paradigms for how computers and collaborations are used to study Earth processes. If you have written open-source software that could be useful to others, we look forward to seeing your submission. This session will not only be an opportunity to showcase your own packages and learn about other available tools, we also hope it will be an opportunity to connect with others working on related problems and lead to opportunities to form new collaborations. The session will be accompanied by a posters where the audience can engage individually with the presenters. We welcome submissions from all domains.
Co-Organized:
Index Terms:
1902 Community modeling frameworks [INFORMATICS]
1976 Software tools and services [INFORMATICS]
1978 Software re-use [INFORMATICS]
3299 General or miscellaneous [MATHEMATICAL GEOPHYSICS]
Primary Convener: Lindsey Justine Heagy, University of California Berkeley, Department of Statistics, Berkeley, United States
Conveners: Rene Gassmoeller, University of California Davis, Earth and Planetary Sciences, Davis, United States, Leonardo Uieda, University of Hawaii at Manoa, School of Ocean & Earth Science & Technology, Honolulu, HI, United States and Jens F Klump, CSIRO Earth Science Resource Engineering, Perth, Australia
Primary Liaison: Lindsey Justine Heagy, University of California Berkeley, Department of Statistics, Berkeley, United States
MTPy: A Python toolbox for magnetotelluric data (Invited) (488587)
Jared Peacock1, Alison L. Kirkby2, Fei Zhang2, Rakib Hassan3 and Jingming Duan2, (1)U.S. Geological Survey, Menlo Park, CA, United States, (2)Geoscience Australia, Canberra, Australia, (3)Geoscience Australia, Canberra, ACT, Australia
BASIN-3D: An Open-Source Data Synthesis Framework for Earth Science (517623)
Val Hendrix1, Danielle S Christianson1, Susan Hubbard2, Deb Agarwal1 and Charuleka Varadharajan3, (1)Lawrence Berkeley National Laboratory, Berkeley, CA, United States, (2)Lawrence Berkeley National Laboratory, Earth and Environmental Sciences, Berkeley, CA, United States, (3)Lawrence Berkeley National Laboratory, Earth and Environmental Sciences Area, Berkeley, CA, United States
Akvo: A surface nuclear magnetic resonance workbench (520203)
Trevor Paul Irons, University of Utah, Energy and Geoscience Institute, Dept. of Civil & Environmental Engineering, Salt Lake City, UT, United States, M. Andy Kass, Aarhus University, Geoscience, Aarhus C, Denmark, Benjamin R. Bloss, USGS, Geology, Geophysics, and Geochemistry Science Center, Denver, CO, United States and Thomas Kremer, University of Nantes, Nantes, France
pyOpenSci Promoting Open Source Python Software To Support Open Reproducible Science (Invited) (541546)
Leah A Wasser, University of Colorado at Boulder, Earth Lab Earth Analytics Education Initiative - CIRES, Boulder, CO, United States and Chris Holdgraf, University of California, Berkeley, Berkeley Institute for Data Science, Berkeley, CA, United States
libCEED: an open-source library for efficient high-order operator evaluations (543582)
Valeria Barra1, Jed Brown1, Jeremy Thompson2 and Yohann Dudouit3, (1)University of Colorado at Boulder, Computer Science, Boulder, CO, United States, (2)University of Colorado at Boulder, Applied Mathematics, Boulder, United States, (3)Lawrence Livermore National Laboratory, Livermore, CA, United States
SoilMAP: An Open Source Python Library for Developing Algorithms and Specialized User Interfaces that Integrate Multiple Disparate Data Sources Including Near-Real-Time Sensor Data for Streamlined Monitoring of Experiments and Analysis. (544171)
Jerry Bieszczad1, Mattheus P. Ueckermann1, Rachel Gilmore2 and Marek G Zreda3, (1)Creare LLC, Hanover, NH, United States, (2)Creare LLC, Engineering, Hanover, United States, (3)Univ Arizona, Tucson, AZ, United States
Open source tools for sediment classification using compositional backscatter in fluvial environments (559128)
James Fisher1, Daniel Buscombe2, Chris W Welcker1, Kelvin Anderson1 and Jeffery T Conner, (1)Idaho Power Company, Boise, ID, United States, (2)Northern Arizona University, Flagstaff, AZ, United States
PyGMT: Accessing the Generic Mapping Tools from Python (571307)
Leonardo Uieda, University of Hawaii at Manoa, School of Ocean & Earth Science & Technology, Honolulu, HI, United States and Paul Wessel, University of Hawaii at Manoa, Earth Sciences, Honolulu, HI, United States
ObsPy -- A Python Library for Seismology (577013)
Tobias Megies, Ludwig Maximilians University of Munich, Munich, Germany, Lion Krischer, ETH Zurich, Department of Earth Sciences, Institute of Geophysics, Zurich, Switzerland, Derrick JA Chambers, Centers for Disease Control and Prevention, Spoakne, WA, United States, Tom Eulenfeld, Friedrich Schiller University of Jena, Jena, Germany, Calum John Chamberlain, Victoria University of Wellington, School of Geography, Environment, and Earth Sciences, Wellington, New Zealand, Thomas Lecocq, Royal Observatory of Belgium, Brussels, Belgium, Robert Barsch, Ludwig Maximilian University of Munich, Munich, Germany and ObsPy Development Team
A Python program for Extracting Significant Vertical Features from LiDAR-DEM to improve Unstructured Finite Element Meshes (586961)
Shu Gao1, Matthew V Bilskie2 and Scott C Hagen1,2, (1)Louisiana State University, Civil and Environmental Engineering, Baton Rouge, LA, United States, (2)Louisiana State University, Center for Coastal Resiliency, Baton Rouge, LA, United States
Integrated Seismic Program: A New Tool for Seismic Array Analysis (592842)
Araceli Garcia-Yeguas, University of Granada, Granada, Spain, Roberto Cabieces, Royal Spanish Navy Observatory, San Fernando, Spain and Andrés Olivar-Castaño, University of Oviedo, Oviedo, Spain
ingestr: An R package for reading environmental data from raw formats into dataframes (608577)
Rachael E Blake, Annapolis, MD, United States, Joseph Shannon, Michigan Technological University, School of Forest Resources and Environmental Sciences, Houghton, MI, United States and Timothy L Whiteaker, CRWR, Austin, TX, United States
An Introduction to the Stationxml-seed-converter and Stationxml-validator, a Set of FDSN-StationXML Metadata Utilities (608813)
Rick B Benson, Incorporated Research Institutions for Seismology, Data Managment Center, Seattle, WA, United States, Tim Ronan, IRIS Data Management Center, Seattle, WA, United States, Yazan Y Suleiman, IRIS-DMC, Seattle, WA, United States, Robert E Casey, IRIS DMC, Seattle, WA, United States and Chad M Trabant, IRIS Data Management System, Seattle, WA, United States
New Capabilities of the SCEC Unified Community Velocity Model (UCVM) Software Framework (616196)
Philip J Maechling1, Mei-Hui Su2, Andreas Plesch3, John H Shaw4 and Scott Callaghan1, (1)Southern California Earthquake Center, Los Angeles, CA, United States, (2)University of Southern California, Southern California Earthquake Center, Los Angeles, CA, United States, (3)Harvard University, Earth and Planetary Sciences, Cambridge, MA, United States, (4)Harvard Univ, Earth and Planetary Sciences, Cambridge, MA, United States
