IN013
Global community efforts to make Samples, Specimens, and Sampling Features (as well digital information about them) comply with the FAIR and CARE principles

Session ID#: 161625

Session Description:
Billions of samples have been acquired, and are considered cornerstones of research in the Earth, Environmental, and Planetary Sciences. Where catalogs of sample collections exist they are heterogeneous: few are online making it difficult for researchers to find and reuse samples, as well as locate any derived data (images, observations, analytical data, etc).

Increasing costs of field campaigns and sites that can no longer be accessed mean the value of existing collections as reusable resources is evolving; multiple stakeholders are now trying to ensure samples comply with the FAIR and CARE principles.

This session seeks papers on any part of the samples ecosystem from collection/creation to ultimate preservation/destruction, including those working on creating a global network of FAIR samples and data derived from them. Submissions are welcome from:

  • Researchers who collect/work with samples;
  • Professionals who manage samples (museums, repositories, etc.);
  • Cyberinfrastructure providers who support tools and services for samples.
Index Terms:

1908 Cyberinfrastructure [INFORMATICS]
1946 Metadata [INFORMATICS]

Primary Convener:  Sarah Ramdeen, Columbia University, Lamont-Doherty Earth Observatory, Palisades, United States
Convener:  Lesley A Wyborn, Australian National University, Canberra, ACT, Australia
 
Internet of Samples : Metadata Enhancement for Material Type and Specimen Type (Invited) (1051589)
Hyunju Song1, Dave Vieglais2, Hong Cui3, Danny Mandel3, Quan Gan3, Stephen M Richard4, Kerstin Lehnert5, Eric C Kansa6, Neil Davies7, John Deck7 and Chris Meyer8, (1)University of Arizona, Tucson, AZ, United States, (2)University of Kansas, Lawrence, KS, United States, (3)University of Arizona, Tucson, United States, (4)U.S. Geoscience Information Network, Tucson, AZ, United States, (5)Columbia University, Lamont-Doherty Earth Observatory, Palisades, United States, (6)Open Context, The Alexandria Archive Institute, San Francisco, United States, (7)University of California Berkeley, Berkeley, CA, United States, (8)Smithsonian National Museum of Natural History, Invertebrate Zoology, Washington, DC, United States
 
Solid Earth Chemistry Data Standardization and Machine Learning (1055378)
J ZhangZhou, Zhejiang University, Hangzhou, China and ZJU Earth Data Team
 
Making Physical Geologic Collections Available in the Digital Realm (1068262)
Douglas Curl and Elizabeth L Adams, Kentucky Geological Survey Lexington, Lexington, KY, United States
 
The Polar Rock Repository: Making Rock/Dredge/Unconsolidated Samples Available Online for Research (1078467)
Anne Grunow, Byrd Polar and Climate Research Center, Columbus, OH, United States and Erica Lynn Maletic, Byrd Polar and Climate Research Center, Columbus, United States
 
Very Long-term Periodicity of Episodic Zircon Production and Earth System Evolution (1099433)
Yujing Wu1, Xianjun Fang1, Linhua Jiang2, Biao Song3, Baofu Han1, Mingsong Li1 and Jianqing Ji1, (1)Peking University, School of Earth and Space Sciences, Beijing, China, (2)Peking University, Department of Astronomy, School of Physics, Beijing, China, (3)Institute of Geology, Chinese Academy of Geological Sciences, Beijing, China
 
Surfacing Specimen Citations: Machine Learning, Manual Annotation, and Impact Metrics for Natural History Collections (1115476)
Andrea Thomer1, Sara Lafia2, Cody Thompson3, Ellen Cassidy4 and Katherine Polasek4, (1)University of Arizona, School of Information, Tuscon, United States, (2)University of Michigan Ann Arbor, Institute for Social Research, Ann Arbor, United States, (3)University of Michigan Ann Arbor, Museum of Zoology, Ann Arbor, United States, (4)University of Michigan Ann Arbor, Ann Arbor, United States
 
Sample tracking and synthesis needs for exploring ecosystem response to climate and environmental disturbance (1121127)
Joan E Damerow1, Elisha M Wood-Charlson1, Charuleka Varadharajan1, Mikayla Borton2, Eoin Brodie3, Richard S. Canon4, Shreyas Cholia1, Paramvir Dehal5, Zachary Crockett6, Emiley Eloe-Fadrosh7, Ricardo J Eloy Alves8, Kjiersten Fagnan7, Amy E Goldman9, David Hays10, Valerie C Hendrix1, Lee Ann McCue11, Nancy Shiao-Lynn Merino12, Marka Miller4, Chris Mungall13, Supratim Mukherjee10, T.B.K. Reddy10, Patrick Sorensen3, Montana L Smith14, James Stegen15, Pajau Vangay4, Pamela Weisenhorn16, Steven Wilson17 and Deb Agarwal1, (1)Lawrence Berkeley National Laboratory, Berkeley, CA, United States, (2)Colorado State University, Soil and Crop Sciences, Fort Collins, United States, (3)Lawrence Berkeley National Laboratory, Earth and Environmental Sciences Area, Berkeley, CA, United States, (4)Lawrence Berkeley National Laboratory, Berkeley, United States, (5)Lawrence Berkeley National Lab, Berkeley, United States, (6)Oak Ridge National Laboratory, Oak Ridge, United States, (7)Joint Genome Institute, Walnut Creek, CA, United States, (8)Lawrence Berkeley National Laboratory, Climate and Ecosystem Sciences Division, Berkeley, CA, United States, (9)Pacific Northwest National Laboratory, Biological Sciences, Richland, WA, United States, (10)Joint Genome Institute, Berkeley, United States, (11)Pacific Northwest National Lab, Richland, United States, (12)Lawrence Livermore National Laboratory, Livermore, United States, (13)Lawrence Berkeley National Laboratory, Environmental Genomics and Systems Biology, Berkeley, United States, (14)Pacific Northwest National Laboratory, Environmental Molecular Sciences Laboratory, Richland, United States, (15)Pacific Northwest National Laboratory, Richland, United States, (16)Argonne National Laboratory, Argonne, IL, United States, (17)Joint Genome Institute, Berkeley, CA, United States
 
Curation and Accessibility of International Ocean Discovery Program Cores, Samples and Data (1123324)
Michelle Penkrot1, Ursula Roehl2, Yusuke Kubo3, Vincent P Percuoco1 and Chad Broyles1, (1)Texas A&M University, International Ocean Discovery Program, College Station, United States, (2)MARUM - University of Bremen, Bremen, Germany, (3)JAMSTEC, Kochi Core Center, Nankoku, Japan
 
Island Sampling: Applying the FAIR and CARE Principles to Material Samples in Support of Place-based Sustainability Science (1157207)
Erin Robinson, Self Employed, Washington, DC, United States, Jane Anderson, New York University, Program in Museum Studies, GSAS, New York, United States, Maui Hudson, University of Waikato, Hamilton, New Zealand, Chris Meyer, Smithsonian National Museum of Natural History, Invertebrate Zoology, Washington, DC, United States and Neil Davies, University of California Berkeley, Berkeley, CA, United States
 
New Approaches to Scalable FAIRification of Sample Data (1163600)
Rory Macneil, Edinburgh, Midlothian, UNITED KINGDOM, Sara El-Gebali, SciLifeLab, Uppsala, Sweden and Rorie Edmunds, DataCite, Hannover, Germany
 
Categorization of material sample type across research domains (1164334)
Stephen M Richard1, Hong Cui2, Dave Vieglais3, Sarah Ramdeen4, Hyunju Song5, Neil Davies6, John Deck7, Quan Gan2, Eric C Kansa8, Sarah Kansa8, John Kunze9, Kerstin Lehnert4, Danny Mandel2, Chris Meyer10, Rebecca Snyder11, Ramona Walls12, Yuxuan Zhou2, Ramona Walls13 and iSamples project team, (1)U.S. Geoscience Information Network, Tucson, AZ, United States, (2)University of Arizona, Tucson, United States, (3)University of Kansas, Lawrence, KS, United States, (4)Columbia University, Lamont-Doherty Earth Observatory, Palisades, United States, (5)University of Arizona, Tucson, AZ, United States, (6)University of California Berkeley, Berkeley, CA, United States, (7)University of California Berkeley, Berkeley, United States, (8)Open Context, The Alexandria Archive Institute, San Francisco, United States, (9)Ronin Institute for Independent Scholarship, Westminster, United States, (10)Smithsonian National Museum of Natural History, Invertebrate Zoology, Washington, DC, United States, (11)Smithsonian Institution, National Museum of Natural History, Washington, DC, United States, (12)CyVerse, BIO5 Institute, Tucson, AZ, United States, (13)Critical Path Institute (C-Path), Tucson, United States
 
Empowering research communities to make their Samples FAIR (1187028)
Saebyul Choe1, Sarah Ramdeen1, Kerstin Lehnert1, Sean Cao1 and Dave Vieglais2, (1)Columbia University, Lamont-Doherty Earth Observatory, Palisades, United States, (2)University of Kansas, Lawrence, KS, United States
 
Developing Sample Citation Guidelines with AGU Publishers (1187168)
Valerie Stanley, Oregon State University, College of Earth, Ocean, and Atmospheric Sciences, Corvallis, OR, United States, Sarah Ramdeen, Columbia University, Lamont-Doherty Earth Observatory, Palisades, United States, Andrea Thomer, University of Arizona, School of Information, Tuscon, United States, Joan E Damerow, Lawrence Berkeley National Laboratory, Berkeley, CA, United States, Shelley Stall, American Geophysical Union, Data Leadership, Washington, DC, United States, Chris Erdmann, AGU, Unknown, United States and ESIP Physical Samples Curation Cluster
 
Citing samples and derived analytical data at granularity of the individual object to ensure credit is given to those that undertake and fund the original primary research. (1189562)
Lesley A Wyborn, Australian National University, Canberra, ACT, Australia and Kerstin Lehnert, Columbia University, Lamont-Doherty Earth Observatory, Palisades, United States
 
The IGSN–DataCite Partnership: Realizing the IGSN 2040 Vision (1196377)
Rorie Edmunds, DataCite, Hannover, Germany
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