The increasing demand for antibody-based therapeutics has emphasized the need for technologies to
improve recombinant antibody titers from mammalian cell lines. Moreover, as antibody
therapeutics address an increasing spectrum of indications, interest has increased in antibody
engineering to improve affinity and biological activity. However, the cellular mechanisms that
dictate expression and the relationships between antibody sequence and expression level remain
poorly understood. Fundamental understanding of how mammalian cells handle high levels of
transgene expression and of the relationship between sequence and expression are vital to the
development of new antibodies and for increasing recombinant antibody titers. To address these issues, we
created a panel of antibody mutants that vary by a single amino acid at Kabat position 49 (heavy
chain framework), resulting in differential transient and stable titers with no apparent loss of antigen
affinity. Through analysis of mRNA, gene copy number, intracellular antibody content, and
secreted antibody, we found that while translational/post-translational mechanisms are limiting in
transient systems, transcription becomes the limiting event upon stable integration of the transgene
following application of selective pressure. We also show that the presence of certain amino acids
at residue 49 results in problematic protein folding and assembly. We postulate that stable antibody
expression is transcriptionally limited to prevent toxic accumulation of misfolded and aggregated
protein within the cell. This study highlights the need for proper sequence engineering strategies
when developing therapeutic antibodies and alludes to the use of transient expression as a predictor
of stable expression behavior.
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