Preliminary Program subject to change
T4003 - Proteomic Approaches to Systems Biology
OverviewWith high-throughput proteomic technology becoming so prevalent, the natural next question is how to make use of such information. The goal for this session is to discuss how and where proteomic technology is being used to advance or complement our understanding of systems biology. Likewise, is systems biology informing our approach to proteomics? Research describing the development and testing of new hypotheses, as well as describing new techniques relating proteomics and systems biology are welcome.
Primary SponsorTopical 4 - Systems Biology (T4)

Chair

Eric Shusta
Assistant Professor
University of Wisconsin
1415 Engineering Drive
Madison, WI 53715
Phone Number: (608) 265-5103
Email: shusta@engr.wisc.edu

CoChair

Phillip C. Wright
Professor and EPSRC Advanced Research Fellow
The University of Sheffield
Biological & Environmental Systems Group
Department of Chemical and Process Engineering, Mappin Street
Sheffield, S1 3JD
UK
Phone Number: (0)1142227577
Fax Number: (0)1142227501
Email: p.c.wright@sheffield.ac.uk
Towards a Systems Biology Understanding of the Dynamics of Synechocystis Sp. Pcc 6803 during Light-Dark Cycling
Chee Sian Gan, University of Sheffield, Mappin Street, Sheffield, South Yorkshire S1 3JD, UK, Adam M. Burja, Ocean Nutrition Canada, 1721 Lower Water Street, Halifax, NS B3J 1S5, Canada, Kenneth F. Reardon, Colorado State University, Department of Chemical Engineering, Fort Collins, CO 80523-1370 and Phillip C. Wright, The University of Sheffield, Biological & Environmental Systems Group, Department of Chemical and Process Engineering, Mappin Street, Sheffield, S1 3JD, UK
Profiling and Quantitative Analysis of Protein Expression Controlled by Type III Secretion System of the Plant Pathogen Pseudomonas Syringae Pv. Tomato Dc3000
Dacheng Ren1, Leila H. Choe1, Erin J. Finehout1, Philip Bronstein2, Thomas K. Wood3, Alan Collmer4, Kelvin H. Lee1, David Schneider5 and Samuel Cartinhour6, (1)School of Chemical and Biomolecular Engineering, Cornell University, 120 Olin Hall, Ithaca, NY 14853, (2)United States Department of Agriculture-Agricultural Research Service, Plant Science Building Rm 334, Cornell University, Ithaca, NY 14853, (3)Chemical Engineering and Molecular and Cell Biology, University of Connecticut, 191 Auditorium Road, Storrs, CT 06269, (4)Cornell University, Department of Plant Pathology, Cornell University, Ithaca, NY 14853, (5)United States Department of Agriculture-Agricultural Research Service, 743 Rhodes Hall, Cornell University, Ithaca, NY 14853, (6)United States Department of Agriculture - Agricultural Research Service, 325A Plant Science, Cornell University, Ithaca, NY 14853
Integrating Genomic, Transcriptomic and Proteomic Information to Understand Rhsa Function
Kunal Aggarwal1, Leila H. Choe1 and Kelvin H. Lee2, (1)School of Chemical and Biomolecular Engineering, Cornell University, 120 Olin Hall, Ithaca, NY 14853, (2)School of Chemical and Biomolecular Engineering, Cornell University, Ithaca, NY 14853-5201
Solution Phase Reaction Microarrays for Protease Substrate Specificity Determination
Dhaval N. Gosalia1, Cleo Salisbury2, Jonathan Ellman2 and Scott L. Diamond3, (1)University of Pennsylvania, 1150 Vagelos Labs,3340 Smith Walk, Philadelphia, PA 19104, (2)University of California at Berkeley, Department of Chemistry, Berkeley, CA 94720-1460, (3)University of Pennsylvania, 1024 Vagelos Research Labs, 3340 Smith Walk, Philadelphia, PA 19104
Digital Devices for the Identification and Quantification of Large Sets of Biomolecules Using Engineered Nucleic Acid Sensors
Travis S. Bayer, Department of Biochemistry and Molecular Biophysics, California Institute of Technology, 1200 E. California Blvd., MC 210-41, Pasadena, CA 91125 and Christina Smolke, Division of Chemistry & Chemical Engineering, CalTech, Pasadena, CA 91125
Profiling Membrane Protein Composition of the Brain Microvasculature Using Combinatorial Antibody Libraries
Eric Shusta, University of Wisconsin, 1415 Engineering Drive, Madison, WI 53715 and Xin Xiang Wang, Chemical and Biological Engineering, University of Wisconsin, 1415 Engineering Drive, Madison, WI 53715

Topical 4 - Systems Biology