Preliminary Program subject to change
01A06 Fundamentals of Protein Degradation and Stabilization
OverviewProtein degradation occurs throughout the life cycle of biotechnology products, and can involve a variety of physical and chemical routes. This session seeks contributions that focus at a fundamental level on the mechanism(s), kinetics, and/or quantitative modeling of one or more degradation pathways for proteins in vitro or in vivo. These may include, but are not limited to: deamidation, oxidation, proteolysis, and non-native aggregation. Priority will be given to those contributions that provide insights or applications of general use, and those that apply modern computational or theoretical tools.
Primary SponsorThermodynamics and Transport Properties (01a)

Chair

Christopher J. Roberts
Assistant Professor
Department of Chemical Engineering, University of Delaware
Newark, DE 19716
Phone Number: 302-831-0838
Fax Number: 302-831-1048
Email: roberts@che.udel.edu

CoChair

Bernhardt L. Trout
Associate Professor
MIT
77 Massachusetts Ave., E19-502B
Cambridge, MA 02139
Phone Number: 1-617-258-5021
Fax Number: 1-617-258-5042
Email: trout@mit.edu
Self-Assembly, Phase Separation, and Unfolding of Coarse-Grained Proteins in Solution
Jason K. Cheung, Department of Chemical Engineering, The University of Texas at Austin, Austin, TX 78712, Vincent K. Shen, NIST, Physical and Chemical Properties Division, 100 Bureau Dr., MS 8380, Gaithersburg, MD 20899-8380, Jeffrey R. Errington, University at Buffalo, Dept. of Chemical and Biological Engineering, 509 Furnas Hall, Buffalo, NY 14260 and Thomas M. Truskett, Chemical Engineering and Institute for Theoretical Chemistry, The University of Texas at Austin, 1 University Station, C0400, Austin, TX 78712
Computer Simulation of Fibril Forming Peptides with an Intermediate Resolution Protein Model
Victoria Wagoner, Chemical and Biomolecular Engineering, North Carolina State University, College of Engineering 1, Box 7905, 911 Partners Way, Raleigh, NC 27695 and Carol K. Hall, Department of Chemical and Biomolecular Engineering, North Carolina State University, College of Engineering 1, Box 7905, 911 Partners Way, Raleigh, NC 27695
Computing Free Energies of Peptide-Mediated Protein-Protein Interactions in Modeling Immune System Response
Jindal K. Shah, Chemical and Biomolecular Engineering, Ohio State University, Columbus, OH 43210, Dilip Asthagiri, Los Alamos National Laboratory, Group T-12, MS-B268, Los Alamos, NM 87545 and Michael E. Paulaitis, Ohio State University, 125 Koffolt Laboratories, 140 West 19'th Avenue, Columbus, OH 43210
Impact of Ion Hydration and Preferential Interactions on Salt-Induced Protein Deactivation Kinetics
James M. Broering, Chemical & Biomolecular Engineering, Georgia Tech, 315 Ferst Dr, Atlanta, GA 30332-0363 and Andreas S. Bommarius, Georgia Institute of Technology, School of Chemical Engineering, 315 Ferst Drive N.W., Parker H. Petit Biotechnology Institute, Room 3310, Atlanta, GA 30332-0363
Thermodynamics, Structure, and Oligomerization States of Key Intermediates in Non-Native Chymotrypsinogen Aggregate Initiation and Growth
Jennifer Andrews and Christopher J. Roberts, Chemical Engineering, University of Delaware, Newark, DE 19716
Structural Studies of the Self-Assembly and Stability of Viral Capsids
Hung D. Nguyen and Charles L. Brooks III, Department of Molecular Biology, The Scripps Research Institute, 10550 North Torrey Pines Road, TPC6, La Jolla, CA 92037

Engineering Sciences and Fundamentals