Preliminary Program subject to change
21015 Computational Genomics
OverviewTalks in the field of computational and theoretical analysis of genomic information are solicited. Design and analysis of experiments as well as large scale calculations of regulatory, protein-protein, or host-pathogen interactions are of interest.
Primary SponsorComputational Molecular Science and Engineering Forum (21)
Co-Sponsor(s)Engineering Fundamentals in Life Science (15d)

Chair

Michael W. Deem
Professor
Rice University
6100 Main Street - MS 142
Houston, TX 77005-1892
Phone Number: 713-348-5852
Fax Number: 713-348-5811
Email: mwdeem@rice.edu

CoChair

Yiannis N. Kaznessis
University of Minnesota
Chemical Engineering and Materials Science Department
151 Amundson Hall
Minneapolis, MN 55455-0132
Phone Number: 612-625-1313
Email: yiannis@cems.umn.edu
Global Pairwise Sequence Alignment Using Integer Linear Optimization: a Path Selection Approach
Scott R. McAllister, Rohit Rajgaria and Christodoulos A. Floudas, Chemical Engineering, Princeton University, Dept of Chemical Engineering; A215 Engineering Quadrangle, Princeton, NJ 08544
Degenerative Sequence Motifs Identification
Eric Ho1, Eric Yang2, Samuel Gunderson1 and Ioannis Androulakis2, (1)Molecular Biology and Biochemistry, Rutgers University, Piscataway, NJ 08854, (2)Biomedical Engineering, Rutgers University, Piscataway, NJ 08854
Using Multicellular Pathway Modeling to Guage the Stability of Tissue Differentiation
Richard L. Schiek, Sandia National Laboratories, P.O. Box 5800 MS 0316, Albuquerque, NM 87122-0316 and Elebeoba E. May, Computational Biology, Sandia National Laboratories, P.O. Box 5800 MS 0316, Albuquerque, NM 87122-0316
Selection of Informative Genes in Time-Course Gene Expression Data
Eric Yang and Ioannis Androulakis, Biomedical Engineering, Rutgers University, Piscataway, NJ 08854
A Hierarchical Approach to Identify Phenotype Relevant Pathways
Zheng Li, Department of Chemical Engineering and Material Science, Michigan State University, 2527 Engineering Building, East Lansing, MI 48824, Shireesh Srivastava, Michigan State University, 2527 Engineering Building, East Lansing, MI 48824 and Christina Chan, Chemical Engineering and Material Science, Michigan State University, 2527 Engineering Building, East Lansing, MI 48824
Metabolic and Genomic Analysis of Acetaminophen Metabolism
Stephen A. Guzikowski1, Marianthi Ierapetritou1 and Charles M. Roth2, (1)Chemical and Biochemical Engineering, Rutgers University, 98 Brett Road, Piscataway, NJ 08854, (2)Chemical and Biochemical Engineering and Biomedical Engineering, Rutgers University, 98 Brett Road, Piscataway, NJ 08854

Computational Molecular Science and Engineering Forum