Preliminary Program subject to change
TA001 Genomic Approaches to Systems Biology I
OverviewWith high-throughput genomic technology becoming so prevalent, the natural next question is how to make use of such information. The goal for this session is to discuss how and where genomic technology is being used to advance or complement our understanding of systems biology. Likewise, is systems biology informing our approach to genomics? Research describing the development and testing of new hypotheses, as well as describing new techniques relating genomics and systems biology are welcome.
Primary SponsorTopical A: Systems Biology (TA)

Chair

Peter J. Woolf
Assistant Professor
Chemical Engineering
University of Michigan
Ann Arbor, MI 48109
Phone Number: 734-647-7985
Email: pwoolf@umich.edu

CoChair

Karen Duca
Research Assistant Professor
Virginia Bioinformatics Institute
Washington Street, MC 0477
Blacksburg, VA 24061
Phone Number: (540) 231-2100
Fax Number: (540) 231-2606
Email: kduca@vbi.vt.edu
Gibbs Sampling for Transcription Network Verification Using Gene Expression and Chip-Chip Data
Mark P. Brynildsen and James C. Liao, Chemical Engineering, UCLA, 5531 Boelter Hall, Los Angeles, CA 90095
Bioinformatic Profiling of Short Term Liver Response to Thermal Injury
Eric Yang1, Timothy Maguire1, Francois Berthiaume2, Martin L. Yarmush3 and Ioannis Androulakis1, (1)Biomedical Engineering, Rutgers University, Piscataway, NJ 08854, (2)Massachusetts General Hospital, Harvard Medical School, Cambridge, MA 02138, (3)Biomedical Engineering, Rutgers University, Rutgers University Chemical Engineering 98 Brett Road, Piscataway, NJ 08854
Immune Signaling Gene Expression Exhibits Multiple Temporal Patterns in Influenza Infected Mouse Lung
Vy Lam1, Rosa Gualano2, Jessica Jones2, Michelle Hansen2, Gary Anderson2 and Karen Duca1, (1)Virginia Bioinformatics Institute, Virginia Tech, 1 Washington St., Blacksburg, VA 24061, (2)Department of Pharmacology and CRC for Chronic Inflammatory Diseases, University of Melbourne, Melbourne, Australia
Genomics for the Validation of in Vitro Blood-Brain Barrier Models
Anthony R. Calabria, Chemical and Biological Engineering, University of Wisconsin, 1415 Engineering Drive, Madison, WI 53715 and Eric Shusta, University of Wisconsin, 1415 Engineering Drive, Madison, WI 53715
Defective Virus Genomes: toward Mechanisms of Emergence and Growth
Kristen A. Thompson, Chemical and Biological Engineering, University of Wisconsin - Madison, 1415 Engineering Drive, Madison, WI 53706 and John Yin, Chemical and Biological Engineering, University of Wisconsin-Madison, 3633 Engineering Hall, 1415 Engineering Drive, Madison, WI 53706
An Analysis of the Dose-Dependent Global Transcriptional Response of Saccharomyces Cerevisiae to Multiple DNA-Damaging Agents
Michael G. Benton and Sean P. Palecek, Dept. of Chemical & Biological Engineering, University of Wisconsin - Madison, 1415 Engineering Drive, Madison, WI 53706

Topical A: Systems Biology