We present here a model for simulating proton structural diffusion in molecular dynamics codes. The model uses charge-equilibration techniques to better describe behavior in heterogeneous environments. The quantum aspects of making and breaking covalent bonds are treated with an empirical valence bond (EVB) approach combined with the principles of Car-Parrinello molecular dynamics. This work demonstrates the nature of collective proton conduction in water under different conditions. Future optimization and improvement of the model are also discussed.