Session: Mathematical Approaches in Systems Biology II: Probabilistic Processes (2009 Annual Meeting)

Description:

This session is devoted to theoretical and computational studies of biological systems. Such systems include protein/DNA interactions, protein/protein interactions, genetic networks, metabolic pathways, and signal transduction pathways. Presentations will focus on theoretical and computational developments for the study of the behavior of these systems in response to stimulation or changes in their kinetic and thermodynamic properties. Contributions of novel computational strategies for systems biology are especially welcome.

Sponsor:

Engineering Fundamentals in Life Science

Chair:

Maciek R. Antoniewicz
DuPont Young Professor
Univerisity of Delaware
Chemical Engineering
211 CLB
Newark, DE 19716
Phone Number: 302-831-8960
Fax Number: 302-831-1048
Email: mranton@udel.edu

Co-chairs:

Christopher Henry and Rajanikanth Vadigepalli

Papers:

262a

Mathematical Modeling of Heterogeneous Sub-Cellular Structures: Probability Models for Integrin Cluster Properties in Adherent Cells
Erik S. Welf, University of Delaware; Ulhas P. Naik, University of Delaware; Babatunde A. Ogunnaike, University of Delaware

262b

Diffusive Information Loss Frustrates T Cell Sensing of Antigen Quality
Christopher Govern, MIT; Arup Chakraborty, MIT

262c

Mixture Model On Graph: A Bayesian Approach to Understanding Metabolic Effects of Bioengineering Processes
Josselin Noirel, The University of Sheffield; Sy Ow, The University of Sheffield; J Pandhal, The University of Sheffield; G Sanguinetti, The University of Sheffield; PC Wright, The University of Sheffield

262d

Specifying Experiment Design Points to Discern Between Hypotheses for Models of Intracellular Signaling Pathways Using Sparse Grids
Maia Donahue, Purdue University; Ann E. Rundell, Purdue University

Break

262e

Accuracy of Chemotactic Response to Transient Gradient Signals Studied in Silico
Suparat Chuechote, Case Western Reserve University; Harihara Baskaran, Case Western Reserve University; Steohen J. Fleming, Case Western Reserve University; Heather McGinnis, Case Western Reserve University; Peter J. Thomas, Case Western Reserve University

262f

Modulation of Transition Probability and Temporal Dynamics by the Bistable Rb-E2F Switch
Tae J. Lee, Duke University; Guang Yao, Duke University Medical Center; Joseph R. Nevins, Duke University Medical Center; Lingchong (corresponding author) You, Duke University

262g

Minimal Models of Extrinsic Regulation in Cell-Fate Decisions
Santhosh Palani, University of Pennsylvania; Casim A. Sarkar, University of Pennsylvania

See more of this Group/Topical: Food, Pharmaceutical & Bioengineering Division

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