Session: Proteomics & Metabolomic Approaches to Systems Biology (2009 Annual Meeting)

Description:

With high-throughput proteomic & metabolomic technology becoming so prevalent, the natural next question is how to make use of such information. The goal for this session is to discuss how and where proteomic & metabolomic technology is being used to advance or complement our understanding of systems biology. Likewise, is systems biology informing our approach to proteomics & metabolomics? Research describing the development and testing of new hypotheses, as well as describing new techniques relating proteomics, metabolomics, and systems biology are welcome.

Sponsor:

Topical A: Systems Biology

Chair:

Jennifer L. Reed
Assistant Professor
UW Madison
Chemical & Biological Engineering
1415 Engineering Dr.
Madison, WI 53706
Phone Number: (608)262-0188
Email: reed@engr.wisc.edu

Co-Chair:

Kyongbum Lee

Papers:

475a

Understanding the Role of Autophagy in Filamentous Fungi
Mark R. Marten, Univ. of Maryland, Baltimore County; Liming Zhao, Univ. of Maryland, Baltimore County; Judith K. Pollack, Univ. of Maryland, Baltimore County; Yonghyun Kim, Univ. of Maryland, Baltimore County; Bill J. Moss, Univ. of Maryland, Baltimore County; Usha Sripathineni, Univ. of Maryland, Baltimore County; Steven D. Harris, U. Nebraska, Lincoln; David Schaefer, Towson University

475b

A Metabolomics-Based Analysis of Central Carbon Metabolism in 14 Yeast Species
Mark P. Styczynski, Georgia Institute of Technology; Dawn A. Thompson, Broad Institute of MIT and Harvard; Jenna Pfiffner, Broad Institute of MIT and Harvard; Courtney French, Broad Institute of MIT and Harvard; Aviv Regev, Broad Institute of MIT and Harvard

475c

High-Throughput Reconstruction and Optimization of 130 New Genome-Scale Metabolic Models
Christopher Henry, Argonne National Laboratory; Matt DeJongh, Hope College; Aaron Best, Hope College; Rick Stevens, Argonne National Laboratory

475d

A Novel Outer Approximation Algorithm for the Global Optimization of Metabolic Networks
Carlos Pozo, Universitat Rovira i Virgili; Gonzalo Guillén-Gosálbez, Universitat Rovira i Virgili; Laureano Jimenez, University Rovira i Virgili; Albert Sorribas, Unversity of Lleida

Break

475e

ciFBA: A Scalable Framework for Integrated Analysis of Metabolism and Regulation
Paul A. Jensen, University of Virginia; Jason A. Papin, University of Virginia

475f

Topological Metabolic Analysis for the Interrogation of Metabolic Networks
Adam C. Baughman, Rensselaer Polytechnic Institute; Lealon L. Martin, Rensselaer Polytechnic Institute; Susan T. Sharfstein, Rensselaer Polytechnic Institute

475g

Qualitative Multiscale Methodology for Biological Networks Driven by Experimental and Clinical Data: Insulin Network in Beta Cells and Association with Diabetes
Kosta Makrodimitris, MAKROnanoKosmos; Tom Woolf, Johns Hopkins University

See more of this Group/Topical: Topical A: Systems Biology

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