Session: Mathematical Approaches in Systems Biology I (2010 Annual Meeting)

Description:

This session is devoted to theoretical and computational studies of biological systems. Such systems include protein/DNA interactions, protein/protein interactions, genetic networks, metabolic pathways, and signal transduction pathways. Presentations will focus on theoretical and computational developments for the study of the behavior of these systems in response to stimulation or changes in their kinetic and thermodynamic properties. Contributions of novel computational strategies for systems biology are especially welcome.

Sponsor:

Engineering Fundamentals in Life Science

Chair:

Juergen Hahn
Associate Professor
Texas A& M University
Chemical Engineering
225 Jack E. Brown Engineering Building
College station, TX 77840
Phone Number: (979) 845 3568
Fax Number: (979) 845 6446
Email: hahn@tamu.edu

Co-Chair:

Zeynep Gumus
Instructor
Weill Medical College of Cornell University
Institute for Computational Biomedicine
1300 York Avenue (Box 75)
New York, NY 10065
Phone Number: (212) 746-6384
Fax Number: (212) 746-8690
Email: zeg2002@med.cornell.edu

Papers:

650a

ShReD: A Novel Metric for Determining Reciprocal Interactions Between Biochemical Network Components
Gautham V. Sridharan, Tufts University; Douglas Weaver, Tufts University; Soha Hassoun, Tufts University; Kyongbum Lee, Tufts University

650b

Stochastic Models Integrating Adhesion and Intracellular Signaling Dynamics Affecting Membrane Protrusion in Migrating Cells
Erik S. Welf, North Carolina State University; Jason Haugh, North Carolina State University

650c

Derivation of Transcription Factor Distribution Profiles From Green Fluorescent Protein Reporter Data
Zuyi (Jacky) Huang, Texas A& M University; Yunfei Chu, Texas A& M University; Loveleena Bansal, Texas A& M University; Juergen Hahn, Texas A& M University

650d

Probabilistic Modeling and Analysis of Embryonic Stem Cell Regulatory Network Dynamics and Ethanol Effects On Differentiation towards a Neural Cell State
Rajanikanth Vadigepalli, Thomas Jefferson University; Joshua Ogony, Thomas Jefferson University; Helen Anni, Thomas Jefferson University

Break

650e

Mathematical Modeling of Human Embryonic Stem Cell Differentiation During Endoderm Induction
Keith Task, University of Pittsburgh; Ipsita Banerjee, University of Pittsburgh; Maria Jaramillo, University of Pittsburgh

650f

A Statistical Thermodynamical Interpretation of Metabolism
Friedrich Srienc, University of Minnesota; Pornkamol Unrean, University of Minneasota

650g

Novel Statechart and Control Theory Based Approaches for Gene Network Modeling
Yong-Jun Shin, University of Texas at Dallas; Mehrdad Nourani, University of Texas at Dallas; Leonidas Bleris, University of Texas at Dallas

See more of this Group/Topical: Food, Pharmaceutical & Bioengineering Division

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