Session: Genomic Approaches to Systems Biology II (2010 Annual Meeting)

Description:

A critical component of systems biology is the development of in silico approaches to understand systems of interest. For this session, papers discussing novel uses of in silico methods to understand biological systems, as well as the development of new technologies and algorithms for in silico systems analysis are welcome. Research including experimental work is particularly encouraged.

Sponsor:

Topical A: Systems Biology

Chair:

Katy Kao
Assistant Professor
Texas A&M University
Department of Chemical Engineering
College Station, TX 77843
Phone Number: 979-845-5571
Email: katy@chemail.tamu.edu

Co-chairs:

David R. Nielsen
Assistant Professor
Arizona State University
Department of Chemical Engineering
ECG 301, 501 E. Tyler Mall
Tempe, AZ 85287
Phone Number: 480-965-4113
Email: david.r.nielsen@asu.edu

Peter Heinzelman
Assistant professor
University of Oklahoma
Department of Chemical, Biological & Materials Engineering
100 E. Boyd Street
Norman, OK 73019
Email: pete@ou.edu

Kristala L. J. Prather
Massachusetts Institute of Technology
Chemical Engineering, Synthetic Biology Engineering Research Center (SynBERC)
77 Massachusetts Ave 66-425
Cambridge, MA 02139
Phone Number: 617-253-1950
Fax Number: 617-258-5042
Email: kljp@mit.edu

Papers:

332a

A Comprehensive Profiling of Genome-Wide Transcriptional Programs of Primary Hepatocytes in Vitro Cultures
Yeonhee Kim, Virginia Polytechnic Institute and State University; Christopher D. Lasher, Virginia Polytechnic Institute and State University; Logan M. Milford, Virginia Polytechnic Institute and State University; T. M. Murali, Virginia Polytechnic Institute and State University; Padma Rajagopalan, Virginia Polytechnic Institute and State University

332b

A System Approach to Astrocytoma Progression
Chunjing Wang, University of Illinois, Urbana-Champaign; James A. Eddy, University of Illinois; Nathan Price, University of Illinois

332c

Chronic Alcohol Effects On the System-Wide Transcriptional Regulatory Network Modules and Dynamics During Rat Liver Regeneration
Rajanikanth Vadigepalli, Thomas Jefferson University; Biswanath Patra, Thomas Jefferson University; Egle Juskeviciute, Thomas Jefferson University; Harikrishnadhar Sonnenahalli, Thomas Jefferson University; Sara Crumm, Thomas Jefferson University; Jan B. Hoek, Thomas Jefferson University

332d

Genomic Approaches to Evolutionary History of Primate Cytochromes c
Lawrence I. Grossman, Wayne State University; Denis Pierron, Wayne State University; Juan C. Opazo, Wayne State University; Margit Heiske, Université Victor Segalen Bordeaux 2; Zack Papper, Wayne State University School of Medicine; Monica Uddin, University of Michigan; Gopi C. Markondapatnaikuni, Wayne State University; Derek E. Wildman, Wayne State University School of Medicine; Roberto Romero, Eunice Kennedy Shriver National Institute of Child Health and Human Development, NICHD, NIH, DHHS; Morris Goodman, Wayne State University

332e

Multi-Platform Genome Re-Sequencing of Evolved Strains of the Cellulolytic Actinobacterium Thermobifida Fusca
Yu Deng, Virginia Commonwealth University; Stephen S, Virginia Commonwealth University

Intermission

332f

Towards Genome-Scale Metabolic Reconstruction of Plant Metabolism
Rajib Saha, The Pennsylvania State University; Patrick F. Suthers, The Pennsylvania State University; Costas D. Maranas, The Pennsylvania State University

332g

Comprehensive Analysis of Liver Transcriptome Reveals Distinct Disease Signatures
Yuliang Wang, UIUC; Jaeyun Sung, UIUC; Shuyi Ma, UIUC; Nathan Price, University of Illinois

See more of this Group/Topical: Topical A: Systems Biology

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