Session: Modeling Approaches for Biological Phenomena II (2012 Annual Meeting)

Description:

We invite submissions that describe the application of mathematical modeling to problems in the life sciences. Suggested topics include, but are not limited to, metabolism, signal transduction, and gene regulation. Preference will be given to submissions that directly link mathematical modeling with experimental data. Submissions that describe novel modeling approaches are also encouraged.

Sponsor:

Bioengineering

Chair:

Seda Kizilel
Assistant Professor
Koc University
Chemical and Biological Engineering
Koc University, Rumelifeneri yolu, Sariyer
Istanbul Email: skizilel@ku.edu.tr

Co-Chair:

Mariajose Castellanos
Assistant Professor
UMBC
Chemical, Biochemical, and Environmental Engineering
1000 Hilltop Circle
Baltimore, MD 21250
Fax Number: 410-455-1049
Email: mariajose@umbc.edu

Papers:

436a

Comparison of the Isoprenoid Pathways in Marine Diatoms Using Isotope Assisted Metabolic Flux Analysis and Genome Scale Modeling
Andrew Quinn, University of Maryland; Yuting Zheng, University of Maryland; Steven Hutcheson, University of Maryland; Ganesh Sriram, University of Maryland

436b

Recent Computational Tools for the Analysis of Complex Biochemical Reaction Networks
Daniel Knight, Ohio State University; Haixia Ji, Ohio State University; Martin Feinberg, Ohio State University

436c

Runge-Kutta Tau-Leaping Methods for Accelerating Stochastic Simulations of Biochemical Reaction Networks
Leonard A. Harris, University of Pittsburgh School of Medicine; James R. Faeder, University of Pittsburgh School of Medicine

436d

Mechanism of a Hotdog Fold Thioesterase-Catalyzed Reaction Proposed by QM/MM Metadynamics Simulation
David C. Cantu, Iowa State University; Albert Ardevol, Università della Svizzera italiana; Carme Rovira, Parc Científic Barcelona; Peter J. Reilly, Iowa State University

436e

Splitting Hill-Type Kinetics: Reduced, Modular, Stochastic Simulations
Patrick Smadbeck, University of Minnesota - Twin Cities; Yiannis Kaznessis, University of Minnesota

436f

Use of 3-Dimensional Response Surface Plots for Heat Transport in the Human Eye to Predict Time of Death
Jimmy L. Smart, University of Kentucky

436g

Mapping the Cell Cycle in GS-NS0: Developing a Cyclin Blueprint As a Tool for Optimizing Productivity
D. G. Garcia Münzer, Imperial College London; A. Mantalaris, Imperial College London; E. N. Pistikopoulos, Imperial College London

436h

Modeling Impact of Lipids On Orally Delivered Drug Dissolution
Selena Di Maio, Northeastern University; David E. Budil, Northeastern University; Rebecca L. Carrier, Northeastern University

See more of this Group/Topical: Food, Pharmaceutical & Bioengineering Division - See also TI: Comprehensive Quality by Design in Pharmaceutical Development and Manufacture

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