Session: In Silico Systems Biology: Cellular and Organismal Models II (2012 Annual Meeting)

Description:

A critical component of systems biology is the development of in silico approaches to understand systems of interest. Novel uses of in silico methods to understand biological systems, as well as the development of new technologies and algorithms for in silico systems analysis are examined.

Sponsor:

Topical A: Systems Biology

Chair:

Matthew J. Lazzara
Assistant Professor
University of Pennsylvania
Chemical and Biomolecular Engineering
311A Towne Building
Philadelphia, PA 19104-6393
Email: mlazzara@seas.upenn.edu

Co-Chair:

Clifford L. Wang
Assistant Professor
Stanford University
Chemical Engineering
381 NS Mall
Stanford, CA 94305
Email: cliff.wang@stanford.edu

Papers:

430a

Integrating High-Throughput Data with Biochemical Networks Identifies Functional Regulatory Interactions
Sriram Chandrasekaran, Institute for Systems Biology; Nathan, D. Price, PhD, Institute for Systems Biology

430b

Large-Scale Kinetic Model of Chlamydomonas Reinhardtii Metabolism Reveals Diffuse Control Over Growth Precursors
Mariajose Castellanos, UMBC; Jon Bollinger, UMBC

430c

Comparison of Network Structures That Confer Resilience Against Genetic Perturbations in Microbial Metabolism
Chintan Joshi, Colorado State University; Ashok Prasad, Colorado State University

430d

Contrasting the Metabolic Capabilities of Cyanobacterial Strains for Assessing Bio-Production Platform Selection
Rajib Saha, The Pennsylvania State University; Alex T. Verseput, Department of Chemical Engineering, The Pennsylvania State University; Thomas J. Mueller, Department of Chemical Engineering, The Pennsylvania State University; Costas D. Maranas, The Pennsylvania State University

430e

MC³: A Tool for Model and Constraint Consistency Checking of Stoichiometric Biochemical Network Models
Ehsan Ullah, Tufts University; Mona Yousofshahi, Tufts University; Soha Hassoun, Tufts University; Russell Stern, Tufts University

430f

Linear Programming-Based Algorithm for Computing Metabolic Pathways From Genome-Scale Networks
Hyun-Seob Song, Purdue University; Noam Goldberg, Argonne National Laboratory; Ashutosh Mahajan, Argonne National Laboratory; Sven Leyffer, Argonne National Laboratory; Doraiswami Ramkrishna, Purdue University

430g

Thermodynamically Constrained Flux Analysis of Actinobacillus Succinogenes
Liliana Angeles-Martinez, University of Manchester; Michael Binns, University of Manchester; Constantinos Theodoropoulos, University of Manchester

430h

From Genomes to Tissue-Level Metabolic Models- A Step towards Pathogenesis and Personalized Medicine
Anu Raghunathan, National Chemical Laboratory; Mridula Prasad, National Chemical Laboratory; Riya Uthup, National Chemical Laboratory

See more of this Group/Topical: Topical A: Systems Biology

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