416 Computational Methods in Biological and Biomedical Systems I


Description:
Biological approaches in chemical engineering are increasingly characterized by systems-level treatment of biological systems and the use of synthetic systems under complex control. Issues such as network size, network cross-talk, and parameter sloppiness can cause significant problems in both numerical analyses and biological interpretation that must be addressed. This session invites contributions that apply existing numerical methods to systems biology and biomedical simulation problems, as well as contributions that identify unique numerical problems that arise in such biological and biomedical systems and address them with novel approaches.

Sponsor:
Applied Mathematics and Numerical Analysis
Co-Sponsor(s):
Engineering Fundamentals in Life Science (15D), Systems and Process Control (10B)


Chair:
Stacey D. Finley
Assistant Professor
University of Southern California
Biomedical Engineering
Los Angeles, CA
90089
Email: sfinley@usc.edu

Co-chairs:
Nigel Reuel
Assistant Professor
Iowa State University
Chemical and Biological Engineering
Ames, IA
Email: reuel@iastate.edu

Ashlee N. Ford Versypt
Assistant Professor
Oklahoma State University
School of Chemical Engineering
423 Engineering North
Stillwater, OK
74078
Email: ashleefv@okstate.edu


Papers:
Effect of Circadian Disruption on Hepatic Gluconeogenesis
Seul-A Bae, Rutgers, The State University of New Jersey; Ioannis P. Androulakis, Rutgers, The State University of New Jersey
A PK/PD Model of ACE Inhibition in Kidney Cells for Treatment of Diabetic Tissue Damage
Minu R. Pilvankar, Oklahoma State University; Hui Ling Yong, Oklahoma State University; Ashlee N. Ford Versypt, Oklahoma State University
Dynamic Analysis of the DNA Sensing Pathway Predicts Host Immune Response
Robert W. Gregg, University of Pittsburgh; Saumenda N. Sarkar, University of Pittsburgh; Jason E. Shoemaker, University of Pittsburgh
Computational Modeling of Tuberculosis Granuloma Activation
Steve M. Ruggiero, Oklahoma State University; Minu R. Pilvankar, Oklahoma State University; Ashlee N. Ford Versypt, Oklahoma State University
Investigating Cholera Toxin Binding Mechanism with Gangliosides Via Kinetic Modeling and Experimental Measurements
Dongheon Lee, Texas A&M University; Singla Akshi, Texas A&M University; Hung-Jen Wu, Texas A&M University; Joseph Sangil Kwon, Texas A&M University
Biomarker Identification in Autism Spectrum Disorder: Common Pitfalls and Emerging Strategies
Daniel P. Howsmon, Rensselaer Polytechnic Institute; Troy Vargason, Rensselaer Polytechnic Institute; Uwe Kruger, Rensselaer Polytechnic Institute; Juergen Hahn, Rensselaer Polytechnic Institute
Stability Analysis of Stochastic SchlöGl Model
Michail Vlysidis, University of Minnesota; Yiannis N. Kaznessis, University of Minnesota
Abstract Submissions Closed
See more of this Group/Topical: Computing and Systems Technology Division