674 Modeling and Engineering Cellular Communities


Description:
This session will focus on engineering cellular communities ranging from genetic manipulation of multi-organism interaction, to process manipulation to integrate division of labor of organisms for the useful application including health, food safety and production of biochemicals. The methods for these efforts include metabolic engineering, synthetic biology, computational modeling and process engineering approaches.

Sponsor:
Bioengineering
Co-Sponsor(s):
Engineering Fundamentals in Life Science (15D)


Chair:
Rajib Saha
Assistant Professor
University of Nebraska-Lincoln
Department of Chemical and Biomolecular Engineering
213 Othmer Hall
Lincoln, NE
68508
Email: rsaha2@unl.edu

Co-Chair:
Ophelia S. Venturelli
Assistant Professor
University of Wisconsin-Madison
Biochemistry
Madison, WI
94704
Email: venturelli@wisc.edu


Papers:
674a
Steadycom: Modeling Microbial Communities Under Steady-State Growth
Siu Hung Joshua Chan, The Pennsylvania State University; Margaret Simons-Senftle, The Pennsylvania State University; Costas D. Maranas, The Pennsylvania State Univeristy
674b
Intracellular Metabolic Circuits Shape Intercellular Interactions in Multi-Species Microbial Games
Ali R. Zomorrodi, Boston University; Daniel Segrè, Boston University
674c
Elucidating Parameters in Dynamic Microbial Community Models Using Nonlinear Programming
Sungho Shin, University of Wisconsin-Madison; Ophelia S. Venturelli, University of Wisconsin-Madison; Victor M. Zavala, University of Wisconsin-Madison
674d
Constraint-Based Community Modeling Reveals Condition-Dependent Alternate Interactions
Cristal Zuniga P, University of California; Karsten Zengler, University of California
674e
Engineered Biofilms for Isobutanol Production: In silico Modeling of a Two-Species Bacterial Community
Michael A. Henson, University of Massachusetts - Amherst; Ayushi Patel, University of Massachusetts-Amherst; Ross P. Carlson, Montana State University
674f
Microbiome-Virome Interactions in Bovine Rumen: The Role of Auxiliary Metabolic Genes in Relaxing Metabolic Bottlenecks
Mohammad Mazharul Islam, University of Nebraska-Lincoln; Wheaton Schroeder, University of Nebraska - Lincoln; Rajib Saha, University of Nebraska-Lincoln; Samodha C. Fernando, University of Nebraska-Lincoln
674g
Development and Application of Integrated Pipeline for the Modeling and Analysis of Microbial Communities in the Doe Systems Biology Knowledgebase
Christopher S. Henry, Argonne National Laboratory; Pamela Weisenhorn, Argonne National Laboratory; José P. Faria, Argonne National Laboratory; Janaka N Edirisinghe, Argonne National Laboratory; Ronald C. Taylor, Pacific Northwest National Laboratory; Hyun-Seob Song, Pacific Northwest National Laboratory; Hans C. Bernstein, Pacific Northwest National Laboratory; Jeremy Zucker, Pacific Northwest National Laboratory; Stephen R. Lindemann, Pacific Northwest National Laboratory; Adam P. Arkin, UC Berkeley
Abstract Submissions Closed
See more of this Group/Topical: Food, Pharmaceutical & Bioengineering Division
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