Session: Methods & Software 2 (Conference on Constraint-Based Reconstruction and Analysis (COBRA 2018))

Tuesday, October 16, 2018: 4:00 PM - 5:45 PM

Description:

Methods & Software 2

Sponsor:

General

4:00 PM

An Ecology of Modeling Methods, Data, and Tools to Decipher Functional Delegation and Species Interactions within a Microbiome
Christopher S. Henry, Pamela Weisenhorn, Daniel van der Lelie, James G. Jeffryes, Dylan C. Chivian, José P. Faria, Janaka N Edirisinghe, Filipe Liu, Samuel M.D. Seaver, Harry Dudley, Qizhi Zhang, Boris Sadkhin, Nidhi Gupta, Tian Gu, Ronald C. Taylor, Hyun-Seob Song, Hans C. Bernstein, Jeremy Zucker, Stephen R. Lindemann, Jack Gilbert, Robert Cottingham and Adam Arkin

4:25 PM

Thermodynamic Framework for Mutant Phenotype Prediction
Tolutola Oyetunde and Yinjie J. Tang

4:50 PM

Dynamic FBA with Global Constraints on Cellular Protein Fraction
Eivind Almaas, Emil Karlsen, Christian Schulz and Nikolay Martyushenko

5:15 PM

Incorporating Flux Sampling into a Minimal Assumption Dynamic Flux Balance Analysis Algorithm
St. Elmo Wilken, Linda Petzold and Michelle O'Malley

5:40 PM

Creation and Analysis of Biochemical Constraint-Based Models: The Cobra Toolbox v3.0
Ronan M.T. Fleming

6:05 PM

Memote: A Community Driven Effort Towards a Standardized Genome-Scale Metabolic Model Test Suite
Christian Lieven, Moritz E. Beber, Brett G. Olivier, Frank T. Bergmann and Nikolaus Sonnenschein

See more of this Group/Topical: General Submissions

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