Translational Genomics in Agriculture

Significant advances in recent years have enhanced our understanding of structural and functional aspects of plant genomes. Complete genome sequence has become available for some plant species, while draft genome sequences are being assembled for others. Advances in next-generation sequencing and high-throughput genotyping technologies have made it possible to not only genotype at high-density, but to even re-sequence the mapping populations or germplasm collections. Routine linkage mapping approaches are being transformed to genome-wide association studies (GWAS) for the identification of important marker-trait associations. Marker-assisted selection (MAS) has become an integral part of crop breeding programmes in developed countries/private sector, and in developing countries the use of MAS in breeding programmes has been applied to develop superior varieties/hybrids with better agronomic performance and enhanced resistance/tolerance to biotic/abiotic stresses. New breeding approaches such as marker-assisted recurrent selection (MARS) and genomic selection (GS) are also being used for improving complex traits such as drought tolerance. This workshop is planned to invite genome specialists with extensive experience in genomics-assisted breeding from both public and private sectors to share their experience and propose novel ideas to translate existing genomics knowledge toward the development of new varieties/hybrids. This workshop is expected to catalyze public sector breeding programmes from Asia and Africa to undertake/accelerate translational genomics that will ensure food security in developing countries.
Date: Sunday, March 17, 2013
Time: 1:00 PM-3:00 PM
Room: Cardinal
Organizer:
Rajeev Varshney
1:00 PM
1:20 PM
Genomics of Functional and Nutritional Traits in Cereals
Robert Henry, University of Queensland

1:40 PM
Domestication of the Barley Genome
Andreas Graner, IPK Gatersleben

2:00 PM
Comparative Genome Analysis of Flowering Genes in Legume Crops
Suk-Ha Lee, Seoul National University; Yang Jae Kang, Seoul National University; Moon Young Kim, Seoul National University

2:20 PM
Allelic Variation and Gene Duplication Determine Boron Toxicity Tolerance in Bread and Durum Wheat
Margaret Pallotta, Australian Centre for Plant Functional Genomics; Thorsten Schnurbusch, IPK; Julie Hayes, Australian Centre for Plant Functional Genomics; Alison Hay, Australian Centre for Plant Functional Genomics; Ute Baumann, Australian Centre for Plant Functional Genomics; Peter Langridge, Australian Centre for Plant Functional Genomics; Tim Sutton, Australian Centre for Plant Functional Genomics

2:40 PM
Genomic Approaches for Improving Flooding and Salt Stress Tolerance in Rice
Abdelbagi M. Ismail, International Rice Research Institute; Damien J. Platten, International Rice Research Institute; Endang M. Septiningsih, International Rice Research Institute; Uma S. Singh, International Rice Research Institute; Bertrand Collard, International Rice Research Institute; Michael J. Thomson, International Rice Research Institute; Glenn Gregorio, International Rice Research Institute

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