A total of 3969 mapped reads were detected, 3925 from T. parva Muguga and 3916 from T. parva 7014. From the mapped reads, 3788 transcripts were shared between the two isolates isolates while n=53 transcripts were exclusively detected from T. parva Muguga and n=44 from T. parva 7014. A total of 717, 788 and 738 transcripts were identified as significantly differentially expressed in the analysis of MGA/7014A, MGA/7014B and MGB/7014A, respectively. However, only 461 differentially expressed genes (DEGs) were identified as common between the three datasets, 64.6% of which were annotated in the NCBI non-redundant protein database. Among the common DEGs, 151 were assigned to gene ontology categories; using the Kyoto Encyclopedia of Genes and Genomes pathway database, 89 DEGs were sorted into 137 pathways. This comprehensive transcriptomic analysis provides fundamental information on the genes and pathways involved in T. parva infections.
