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Genome Mapping, Tagging & Characterization: General Comparative

Date: Monday, January 14, 2013
Time: 7:00 AM-10:00 PM
Room: Grand Exhibit Hall
P0673
The Use of NexGen Sequencing and Junction Sequence Analysis Bioinformatics to Achieve Molecular Characterization of Crops
Carl Garnaat, Monsanto; Liang Guo, Bayer Crop Science; Yongpan Yan, Monsanto; Jeanna Groat, Monsanto; Andre Silvanovich, Monsanto; Lyle Ralston, Monsanto; Mingya Huang, Monsanto; Qing Tian, Monsanto; Allen Christian, Monsanto; Nordine Cheikh, Monsanto; Jerry Hjelle, Monsanto; Stephen Padgette, Monsanto; Gary Bannon, Monsanto; David Kovalic, Monsanto

P0674
TranSNiPtomics: Massive Analysis of cDNA Ends (MACE) for simultaneous Gene Expression Profiling and Genotyping in High Throughput
Bjorn Rotter, GenXPro-GmbH; Anne Plötner, GenXPro-GmbH; Ruth Jüngling, GenXPro-GmbH; Klaus Hoffmeier, GenXPro-GmbH; Guenter Kahl, University of Frankfurt am Main; Peter Winter, GenXPro-GmbH

P0675
The Ancestral Repetitive Nature of Some Genomic "Dark Matter"
Florian Maumus, URGI-INRA; Hadi Quesneville, INRA - URGI

P0676
Correction for Measurement Error from Genotyping-by-Sequencing in Genomic Variance and Genomic Prediction Models
Bilal H. Ashraf, Aarhus University; Luc L. Janss, Aarhus University; Just Jensen, Aarhus University; Torben Asp, Molecular Biology and Genetics, Aarhus University; Christian Sig Jensen, DLF-TRIFOLIUM

P0677
Nested Insertions and Accumulation of Indels in Coding-MULEs (Mutator-like Transposable Elements) are Negatively Correlated with Abundance of MULEs in Maize and Rice
Dongyan Zhao, Michigan State University; Ning Jiang, Michigan State University

P0678
Comparative Analysis of Three Magnaporthaceae Mitochondrial Genomes Reveals Group I Introns in the Soil-Inhabiting Pathogens
Patricia Okubara, USDA ARS; Amit Dhingra, Department of Horticulture, Washington State University; Li-Jun Ma, The Broad Institute; Ralph A. Dean, North Carolina State University

P0679
Genome-Wide Comparative Analysis of LTR Retrotransposon Dynamics In Flax (Linum usitatissimum) and Its Related Genomes, Cassava (Manihot esculenta) and Poplar (Populus trichocarpa)
Raja Ragupathy, Agriculture and Agri-Food Canada; Frank M. You, Agriculture and Agri-Food Canada; Sylvie Cloutier, Agriculture and Agri-Food Canada

P0680
Linkage Disequilibrium and Haplotype Blocks in Cattle and Chicken Populations
Ehud Lipkin, Hebrew University of Jerusalem; Marlies A. Dolezal, Università degli Studi di Milano; Alessandro Bagnato, Università degli Studi di Milano; Janet E. Fulton, Hy-Line International; Petek Settar, Hy-Line International; Jesus Arango, Hy-Line International; Neil O'Sullivan, Hy-Line International; Attilio Rossoni, ANARB - Associazione Nazionale Allevatori di Razza Bruna; Theo H.E. Meuwissen, Norwegian University of Life Sciences; Kellie Watson, Aviagen Ltd; Morris Soller, Hebrew University of Jerusalem

P0681
Unlocking the Milk Protein Gene Loci During Mammary Gland Development and Differentiation; a Role for Chromatin
Monique Rijnkels, Baylor College of Medicine; Courtneay Freeman-Zadrowski, Baylor College of Medicine-CNRC; Joseph Hernandez, Baylor College of Medicine-CNRC; Vani Potluri, Baylor College of Medicine-CNRC; Liguo Wang, Mayo Clinic College of Medicine; Wei Li, Baylor College of Medicine-MCB; Danielle Lemay, University of California Davis-genome center

P1029
Genomic Resources for Leersia perrieri: An Outgroup Species For The Genus Oryza
Dario Copetti, University of Arizona- Arizona Genomics

P1030
Molecular Correlates of Programmed Genome Rearrangements in Lamprey
Joseph R. Herdy, University of Kentucky; Jeramiah Smith, University of Kentucky

P1031
Construction of a Comprehensive Linkage Map in the Sea Lamprey, Petromyzon marinus
Melissa Keinath, University of Kentucky; Jeramiah Smith, University of Kentucky

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