Computer Demos 3 - Crop Databases
Date: Monday, January 14, 2013
Time: 12:50 PM-3:00 PM
Room: California
Organizer:
David E. Matthews
1:35 PM
New Data and Functionality of GDR, the Genome Database for Rosaceae
Sook Jung, Washington State University;
Taein Lee, Washington State University;
Stephen P. Ficklin, Washington State University;
Chun-Huai Cheng, Washington State University;
Ping Zheng, Washington State University;
Anna V. Blenda, Clemson University;
Sushan Ru, Washington State University;
Katherine M. Evans, Washington State University;
Cameron Peace, Washington State University;
Nnadozie Oraguzie, Washington State University;
Albert G. Abbott, Clemson University;
Desmond Layne, Clemson University;
Mercy Olmstead, University of Florida;
Fred G. Gmitter, University of Florida, IFAS-CREC;
Chunxian Chen, University of Florida, IFAS-CREC;
Lukas Mueller, Boyce Thompson Institute for Plant Research;
Dorrie Main, Washington State University
1:50 PM
CottonGen: An Integrated Web-Database for Cotton Genomics, Genetics and Breeding Research
Jing Yu, Washington State University;
Sook Jung, Washington State University;
Chun-Huai Cheng, Washington State University;
Stephen P. Ficklin, Washington State University;
Taein Lee, Washington State University;
Ping Zheng, Washington State University;
Don C. Jones, Cotton Incorporated;
Richard G. Percy, USDA-ARS, Southern Plains Agricultural Research Center;
Dorrie Main, Washington State University
2:05 PM
Bioinformatic Solutions in Forest Genomics: Accessing the TreeGenes Database
Jill Wegrzyn, University of California, Davis;
Ben Figueroa, University of California, Davis;
John Yu, University of California, Davis;
Hans Vasquez-Gross, University of California Davis;
John Liechty, University of California, Davis;
Brian Lin, University of California, Davis;
Jacob Zieve, University of California, Davis;
Jason Ip, University of California, Davis;
David Neale, University of California, Davis
2:20 PM
Use of CartograTree to Explore Forest Tree Genomes, Phenotypes, and Environment
Hans Vasquez-Gross, University of California Davis;
John Yu, University of California, Davis;
Ben Figueroa, University of California, Davis;
Damian Gessler, University of Arizona;
David Neale, University of California, Davis;
Jill Wegrzyn, University of California, Davis
2:35 PM
Rice Annotation Project Database (RAP-DB): An Integrative and Interactive Database for Rice Genomics
Hiroaki Sakai, National Institute of Agrobiological Sciences, Japan;
Sungshin Lee, National Institute of Agrobiological Sciences, Japan;
Tsuyoshi Tanaka, National Institute of Agrobiological Sciences, Japan;
Hisataka Numa, National Institute of Agrobiological Sciences;
Jungsok Kim, National Institute of Agrobiological Sciences, Japan;
Yoshihiro Kawahara, National Institute of Agrobiological Sciences;
Hironobu Wakimoto, Hitachi GP;
Takashi Matsumoto, National Institute of Agrobiological Sciences;
Takuji Sasaki, Tokyo University of Agriculture;
Takeshi Itoh, National Institute of Agrobiological Sciences, Japan
