This workshop will consist of four sessions roughly organized as follows:
8:00-9:50 Session One: Genome Projects
10:30-12:30 Session Two: Biological Insight
13:30-14:30 Session Three: Genomics Resources
14:30-15:30 Session Four: Association mapping and GWAS
16:00-17:20 Session Five: Local Adaptation
Date: Sunday, January 11, 2015
Time: 8:00 AM-6:10 PM
Room: Sunrise - Meeting House
Organizers:
Nathaniel R. Street
,
Larry Smart
and
Jeanne Romero-Severson
8:50 AM
Developing Genomic Resources for Green Ash through Deep Transcriptome Sequencing and Low-Coverage Whole Genome Sequencing
Thomas Lane, University of Tennessee Institute of Agriculture;
Jack Davitt, University of Tennessee, Knoxville;
Mark Cook, University of Tennessee Institute of Agriculture;
Nate Henry, University of Tennessee Institute of Agriculture;
Teodora Orendovici-Best, Dept. of Ecosystem Science & Management, Pennsylvania State University;
Nicole Zembower, Dept. of Ecosystem Science & Management, Pennsylvania State University;
Jennifer Koch, The U.S Forest Service;
Mark Coggeshall, University of Missouri;
John E. Carlson, Penn State University;
Margaret Staton, University of Tennessee Institute of Agriculture
9:50 AM
The Manuka Genome project
Amali H. Thrimawithana, The New Zealand Institute for Plant & Food Research Limited;
Ross N Crowhurst, The New Zealand Institute for Plant & Food Research Limited;
Elena Hilario, The New Zealand Institute for Plant & Food Research Limited;
Bruce Smallfield, The New Zealand Institute for Plant & Food Research Limited;
Cecilia H. Deng, The New Zealand Institute for Plant & Food Research Limited;
David Chagne, Plant and Food Research;
David Lewis, The New Zealand Institute for Plant & Food Research Limited;
Ed Morgan, The New Zealand Institute for Plant & Food Research Limited;
Hanh Ngo, The New Zealand Institute for Plant & Food Research Limited;
Helge Dzierzon, The New Zealand Institute for Plant & Food Research Limited;
John Van Klink, The New Zealand Institute for Plant & Food Research Limited;
Kevin M. Davies, The New Zealand Institute for Plant & Food Research Limited;
Murray Boase, The New Zealand Institute for Plant & Food Research Limited;
Nigel Perry, The New Zealand Institute for Plant & Food Research Limited;
Ross Bicknell, The New Zealand Institute for Plant & Food Research Limited;
Kathy Schwinn, The New Zealand Institute for Plant & Food Research Limited
11:10 AM
Adaptation to Drought in Populus: Is Leaf Growth a Key Trait?
Hazel Katherine Smith, University of Southampton;
Henning Wildhagen, Georg-August-University Göttingen;
Maud Viger, University of Southampton;
Mark A. Chapman, University of Southampton;
Billy Valdes-Fragoso, University of Southampton;
Cyril Douthe, Universitat de les Illes Belears;
David Cohen, Université de Lorraine;
Cyril Buré, Université de Lorraine;
Oliver Brendel, Université de Lorraine;
Didier Le Thiec, Université de Lorraine;
Joao Paulo, Biometris, Wageningen UR Plant Science Group;
Sabine Schnabel, Biometris, Wageningen UR Plant Science Group;
Vera Vendramin, IGA Technology Services;
Simone Scalabrin, IGA Technology Services;
Federica Cattonaro, IGA Technology Services;
Dennis Janz, Georg-August-University Göttingen;
Susanna Pollastri, Consiglio Nazionale delle Ricerche;
Gianni Della Rocca, Consiglio Nazionale delle Ricerche;
Simon Rüger, YARA ZIM Plant Technology GmbH;
Mauro Centritto, Consiglio Nazionale delle Ricerche;
Francesco Loreto, Consiglio Nazionale delle Ricerche;
Joost J.B. Keurentjes, Laboratory of Genetics;
Fred E. van Eeuwijk, Wageningen UR - Biometris;
Michele Morgante, Università di Udine;
Jaume Flexas, Universitat de les Illes Belears;
Iréne Hummel, Université de Lorraine;
Marie-Béatrice Bogeat-Triboulot, Université de Lorraine;
Andrea Polle, Georg-August-University Göttingen;
Gail Taylor, University of Southampton
12:10 PM
TreeGenes: A Comprehensive Resource for Forest Tree Genomics
Emily Grau, UC Davis;
Hans Vasquez-Gross, University of California Davis;
John Liechty, Department of Plant Sciences, University of California, Davis;
Jacob Zieve, University of California, Davis;
Damian Gessler, University of Arizona;
David Neale, Dept. Plant Sciences University of California Davis;
Jill Wegrzyn, Department of Ecology and Evolutionary Biology, University of Connecticut
12:30 PM
The Hardwood Genomics Project: Outcomes and Future Directions after Four Years of Resource Development
Margaret Staton, University of Tennessee;
Teodora Orendovici-Best, Dept. of Ecosystem Science & Management, Pennsylvania State University;
Nicole Zembower, Dept. of Ecosystem Science & Management, Pennsylvania State University;
Thomas Lane, University of Tennessee Institute of Agriculture;
Jack Davitt, University of Tennessee, Knoxville;
Tatyana Zhebentyayeva, Clemson University Genomics & Computational Biology Laboratory;
Mark Coggeshall, University of Missouri;
Oliver Gailing, Michigan Technological University;
Haiying Liang, Clemson University;
Jeanne Romero-Severson, University of Notre Dame;
Christopher A. Saski, Clemson University Genomics & Computational Biology Laboratory;
Scott Schlarbaum, University of Tennessee;
Ketia Shumaker, The University of West Alabama;
Nicholas Wheeler, Pennsylvania State University;
John E. Carlson, Penn State University
12:50 PM
The Genome of Fraxinus excelsior (European ash)
Elizabeth Sollars, Queen Mary University of London;
Laura J. Kelly, Queen Mary University of London;
Bernardo Clavijo, The Genome Analysis Centre;
David Swarbreck, The Genome Analysis Centre;
Jasmin Zohren, Queen Mary University of London;
David Boshier, University of Oxford;
Jo Clark, The Earth Trust;
Anika Joecker, Qiagen Aarhus;
Sarah Ayling, The Genome Analysis Centre;
Mario Caccamo, The Genome Analysis Centre;
Richard Buggs, Queen Mary University of London
2:50 PM
Transcriptome Variation in Shrub Willow (Salix) Hybrids
Craig H. Carlson, Cornell University;
Agnes P Chan, J. Craig Venter Institute;
Christopher D. Town, J. Craig Venter Institute;
Vivek Krishnakumar, J. Craig Venter Institute;
Haibao Tang, J. Craig Venter Institute;
Stephen DiFazio, West Virginia University;
Michelle Serapiglia, USDA Sustainable Biofuels and Co-Products;
Lawrence Smart, Cornell University
3:10 PM
Improving Poplar for Biofuel Applications: Elucidating the Genetic Basis of Important Traits in Populus nigra through an Association Genetics Approach in a Natural, Wide Mapping Population
Mike Allwright, University of Southampton;
Hazel Katherine Smith, University of Southampton;
Giovanni Emiliani, CNR-IVALSA, Trees and Timber Institute, Florence;
Adrienne Payne, University of Southampton;
Maud Viger, University of Southampton;
Giorgio Alberti, Università Di Udine;
Alessandro Zaldei, CNR - Institute for Biometeorology;
Davide Scaglione, Parco Tecnologico Padano;
Simone Scalabrin, IGA Technology Services;
Billy Valdes-Fragoso, University of Southampton;
Franchesca Rouse, University of Southampton;
Joao Paulo, Biometris, Wageningen UR Plant Science Group;
Fred E. van Eeuwijk, Wageningen UR - Biometris;
Patricia Faivre Rampant, INRA Evry;
Michele Morgante, Università di Udine;
Gail Taylor, University of Southampton
3:30 PM
Contrasting Genomic Signatures of Local Adaptation in Lodgepole Pine (Pinus contorta) and Interior Spruce (Picea glauca x Picea engelmannii)
Sam Yeaman, University of British Columbia;
Kathryn A. Hodgins, Monash University;
Katie Lotterhos, Wake Forest University;
Haktan Suren, Virginia Tech University;
Tongli Wang, University of British Columbia;
Pia Smets, University of British Columbia;
Kristin Nurkowski, Monash University;
Jason Holliday, Virginia Tech University;
Michael C. Whitlock, University of British Columbia;
Loren H. Rieseberg, University of British Columbia;
Andreas Hamann, University of Alberta;
Sally N. Aitken, University of British Columbia
4:30 PM
Evidence That Allelic Introgression from Populus balsamifera (balsam poplar) Underlies Local Adaptation in P. trichocarpa (black cottonwood)
Adriana Suarez-Gonzalez, Department of Botany, University of British Columbia;
Camille Christe, University of Fribourg;
Armando Geraldes, Department of Botany, University of British Columbia;
Charles A. Hefer, Department of Botany, University of British Columbia;
Christian Lexer, University of Fribourg;
Quentin C. B. Cronk, Department of Botany, University of British Columbia;
Carl Douglas, Department of Botany, University of British Columbia
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