Talks and demonstrations about software and online resources for supporting and advancing research.
Date: Wednesday, January 14, 2015
Time: 10:30 AM-12:40 PM
Room: California
Organizers:
Dave Clements
and
Brian Smith-White
10:30 AM
Bioinformatic Analysis of Genotype By Sequencing (GBS) Data with NGSEP
Claudia Samantha Perea de La Torre, International Center for Tropical Agriculture (CIAT);
Juan Fernando De la Hoz, International Center for Tropical Agriculture (CIAT);
Juan Camilo Quintero, International Center for Tropical Agriculture (CIAT);
Daniel F. Cruz, International Center for Tropical Agriculture (CIAT);
Jorge A. Duitama Castellanos, International Center for Tropical Agriculture (CIAT)
10:50 AM
Flotilla: An Open-Source Toolkit for Single-Cell RNA-Seq Data Analysis
Michael T. Lovci, University of California, San Diego;
Olga B. Botvinnik, University of California, San Diego;
Patrick Liu, University of California, San Diego;
Boyko Kakaradov, University of California, San Diego;
Leen Jamal Schafer, University of California, San Diego;
Yan Song, University of California, San Diego;
Gene W. Yeo, University of California, San Diego
11:50 AM
DNA Polymorphism Database from New-Generation Sequence Read Archive and Analytical Workflow
Takako Mochizuki, Genome Informatics Laboratory, NIG, ROIS;
Yasuhiro Tanizawa, Genome Informatics Laboratory, NIG, ROIS;
Takatomo Fujisawa, Genome Informatics Laboratory, NIG, ROIS;
Naruo Nikoh, Liberal Arts, OUJ;
Atsushi Toyoda, Comparative Genomics laboratory, NIG, ROIS;
Asao Fujiyama, Comparative Genomics laboratory, NIG, ROIS;
Nori Kurata, Plant Genetics Laboratory, National Institue of Genetics;
Hideki Nagasaki, Genome Informatics Laboratory, NIG, ROIS;
Tokurou Shimizu, NARO Institute of Fruit Tree Science;
Eli Kaminuma, Genome Informatics Laboratory, NIG, ROIS;
Yasukazu Nakamura, Genome Informatics Laboratory, NIG, ROIS
