P0079
Bioinformatics: Algorithms - Even

Date: Monday, January 12, 2015
Time: 10:00 AM-11:30 AM
Room:
Java Merging Copy Number Variants (JM-CNV): A New Algorithm for Identifying Copy Number Variant Regions (CNVR)
Joaquim Manoel da Silva, Universidade do Estado de Mato Grosso; Alan Roberto Romaniuc, Embrapa Informática Agropecuária – Laboratório Multiusuário de Bioinformática; Alexandre R. Caetano, Embrapa Recursos Genéticos e Biotecnologia; Poliana F Giachetto, Embrapa Informática Agropecuária; Michel E Beleza Yamagishi, Embrapa Informática Agropecuária

Right-Hand-Side Updating Enables Genomic Prediction with Millions of SNPs
Mario P.L. Calus, Animal Breeding and Genomics Centre, Wageningen UR Livestock Research; Rianne van Binsbergen, Animal Breeding and Genomics Centre, Wageningen UR Livestock Research; Marzieh Heidaritabar, Animal Breeding and Genomics Centre, Wageningen University; Chris Schrooten, CRV BV; Roel F. Veerkamp, Animal Breeding and Genomics Centre, Wageningen UR Livestock Research

Relative Efficacy of GWAS Models for Ordinal Variables
Lucia Gutierrez, College of Agriculture - UDELAR; Agustin Gonzalez-Reymundez, College of Agriculture, Universidad de la Republica - Uruguay; Ariel Castro, College of Agriculture - UDELAR

Multi-Allelic Haplotype Model to Integrate Functional Genomic Information with Genomic Prediction and Variance Component Estimation
Yang Da, Department of Animal Science, University of Minnesota; Chunkao Wang, Department of Animal Science, University of Minnesota; Cheng Tan, Department of Animal Science, University of Minnesota; Dzianis Prakapenka, Department of Animal Science, University of Minnesota; Miku Shigematsu, Department of Animal Science, University of Minnesota; John Garbe, Minnesota Supercomputer Institute, University of Minnesota; Li Ma, Department of Animal and Avian Sciences, University of Maryland

Mixed Model Approach for Genotypic Imputation
Alencar Xavier, Purdue University; Katy Martin Rainey, Purdue University; William Muir, Purdue University

The DNA Integrity Number: A Novel Approach for Objective Integrity Classification of Genomic DNA Samples
Solange Borg, Agilent Technologies; Melissa Huang Liu, Agilent Technologies; Barry McHoull, Agilent Technologies; Marcus Gassmann, Agilent Technologies, Inc.; Adam Inche, Agilent Technologies; Isabell Pechtl, Agilent Technologies; Eva Schmidt, Agilent Technologies

MAAB: A Motif and Amino-Acid Bias Pipeline to Identify Both Intrinsically Disordered and Repetitive Hydroxyproline-Rich Glycoproteins (HRGPs) in 1000 Plant Transcriptomes
Andrew M. Cassin, The University of Melbourne; Kim L. Johnson, The University of Melbourne; Monika S. Doblin, The University of Melbourne; Andrew Lonsdale, The University of Melbourne; Antony Bacic, The University of Melbourne; Carolyn J. Schultz, The University of Adelaide

Detection and Characterization of Copy Number Variations and Complex Genomic Rearrangements in Human Subjects Using Nanochannel Genome Mapping Technology
Zeljko J. Dzakula, BioNano Genomics; Warren Andrews, BioNano Genomics; Ernest Lam, BioNano Genomics; Thomas Anantharaman, BioNano Genomics; Alex Hastie, BioNano Genomics; Han Cao, BioNano Genomics

Characterization of an Integrative Model for Candidate Gene Selection from Genomic Data with Simulated Data Analysis
Brian Sayre, Virginia State University; Ornogeah Wurah, Virginia State University; James M. Reecy, Iowa State University

Network-Based Analysis for Large Soil Microbial Genomics Data
Erliang Zeng, University of South Dakota

Composite Hypothesis Testing of Differential Gene Expression Based on Poisson Models: A Validation Study and Some Considerations
Xiao-Lin Wu, Neogen/GeneSeek; Keyi Wu, Cornell University; Zhihua Jiang, Washington State University

Using LTC Software for Physical Mapping and Assisting in Sequence Assembly
Zeev M. Frenkel, Institute of Evolution, University of Haifa; Vladimir A. Glikson, MultiQTL Ltd.; Abraham B. Korol, Institute of Evolution, University of Haifa

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