P0069
Genome Mapping, Tagging & Characterization: Other Plant Species - Even

Date: Monday, January 12, 2015
Time: 10:00 AM-11:30 AM
Room:
The Flax (Linum usitassimum) Genome, A Revolution in Evolution
Christopher Cullis, Case Western Reserve University

GBS for Ipomoea trifida: A Next Generation Marker System for Sweetpotatoes
Awais Khan, International Potato Center; David Maria, International Potato Center (CIP); Reinhard Simon, International Potato Center (CIP); Federico Diaz, International Potato Center (CIP); Raul Eyzaguirre, International Potato Center (CIP); Wolfgang Grüneberg, International Potato Center (CIP)

EMS Mutants and Functional Genomics to Dissect Cell Wall Biology in Flax
Simon W Hawkins, University of Lille 1; Maxime Chantreau, University of Lille 1; Wout Boerjan, Department of Plant Systems Biology, VIB; Arata Yoshinaga, Kyoto University; François Mesnard, Université de Picardie Jules Verne; Brigitte Chabbert, INRA URCA UMR614 FARE

Genome Assembly of Amaranthus Hypochondriacus:  An Emerging C4 Pseudo-Cereal Grain Crop
Jared Clouse, Brigham Young University; Justin T. Page, Brigham Young University; Thiruvarangan Ramaraj, National Center for Genome Resources (NCGR); Josh Udall, Brigham Young University; Eric N. Jellen, Brigham Young University; Jeff Maughan, Brigham Young University

Comparative Study of Lysine Biosynthesis in Edible Grains of Caryophyllales
Meeta Sunil, Institute of Bioinformatics and Applied Biotechnology; Nivedita Hariharan, Institute of Bioinformatics and Applied Biotechnology; Arjun Sreedhar, Institute of Bioinformatics and Applied Biotechnology; Thejas Makam Shivakumar Gupta, Institute of Bioinformatics and Applied Biotechnology; Keerthivasan Chandradoss Raanin, Institute of Bioinformatics and Applied Biotechnology; Savita Karthikeyan, Institute of Bioinformatics and Applied Biotechnology; Subhashini Srinivasan, Institute of Bioinformatics and Applied Biotechnology; Bibha Choudhary, Institute of Bioinformatics and Applied Biotechnology

de novo Assembly and Molecular Marker Development in Tall Fescue Using RNA Seq Data
Shyamal K Talukder, The Samuel Roberts Noble Foundation; Perumal Azhaguvel, Syngenta; Konstantin Chekhovskiy, The Samuel Roberts Noble Foundation; Shreyartha Mukherjee, The Samuel Roberts Noble Foundation; Malay C. Saha, The Samuel Roberts Noble Foundation

Genomic Selection Using Genotyping-By-Sequencing Data with Different Coverage Depth in Perennial Ryegrass
Fabio Cericola, Molecular Biology and Genetics, Aarhus University; Luc L. Janss, Molecular Biology and Genetics, Aarhus University; Stephen Byrne, Aarhus University; Dario Fè, Molecular Biology and Genetics, Aarhus University; Adrian Czaban, Aarhus University; Torben Asp, Aarhus University; Morten Greve-Pedersen, DLF A/S; Niels Roulund, DLF-Trifolium, St. Heddinge, Denmark; Christian Sig Jensen, DLF A/S; Ingo Lenk, DLF-Trifolium, St. Heddinge, Denmark; Just Jensen, Molecular Biology and Genetics, Aarhus University

The Massive Mitochondrial Genome of the Angiosperm Silene noctiflora Is Evolving By Gain or Loss of Entire Chromosomes

Zhiqiang Wu, Colorado State University; Daniel Sloan, Colorado State University

Partitioning SNPs Identified By GBS into Genome Annotation Classes and Calculating SNP-Explained Variances for Heading Date and Disease Resistance from the Resulting Genomic Relationship Matrices - Lolium perenne
Stephen Byrne, Aarhus University; Fabio Cericola, Molecular Biology and Genetics, Aarhus University; Luc L. Janss, Aarhus University; Just Jensen, Molecular Biology and Genetics, Aarhus University; Dario Fè, Molecular Biology and Genetics, Aarhus University; Bilal H. Ashraf, Molecular Biology and Genetics, Aarhus University; Adrian Czaban, Aarhus University; Morten Greve-Pedersen, DLF A/S; Ingo Lenk, DLF-TRIFOLIUM A/S; Christian Sig Jensen, DLF A/S; Torben Asp, Molecular Biology and Genetics, Aarhus University

Transcriptome Assemblies in Polyploid Spartina (Poaceae, Chloridoideae), Duplicate Gene Detection and Molecular Divergence Using Next-Generation Sequencing
Julien Boutte, University of Rennes 1 - UMR CNRS 6553; Malika Lily Ainouche, University of Rennes 1 - UMR CNRS 6553; Armel Salmon, University of Rennes 1 - UMR CNRS 6553

Genome Size and Chromosome Number Variation Among Caladium Species and Somaclonal Variants
Zhe Cao, University of Florida; Shunzhao Sui, Southwest University; Zhanao Deng, University of Florida

Breeding Lettuce to Maximize Nutrional Content Across Diverse Environments
David W. Still, Cal Poly Pomona; Youngsook You, Cal Poly Pomona; Danielle Ellis, Cal Poly Pomona

Detection and Characterization of Recombination Events at Sequence Level in Recombinant Inbred Lines from an Inter-Specific Cross of Lactuca sativa x L. serriola
Alexander Kozik, Genome Center, University of California; Lutz Froenicke, Genome Center, University of California; Dean Lavelle, Genome Center, University of California; Maria Jose Truco, Genome Center, University of California; Sebastian Reyes Chin-Wo, Genome Center, University of California; Richard Michelmore, Genome Center, University of California

High Quality de novo Assembly of the Common Ice Plant (Mesembryanthemum crystallinum L.) Transcriptome - A Functional Genomics Resource for Crassulacean Acid Metabolism (CAM) and Halophytism
Won Cheol Yim, Department of Biochemistry and Molecular Biology, University of Nevada, Reno; Richard L. Tillett, Nevada Center for Bioinformatics, University of Nevada, Reno; Bahay G. Bilgi, Department of Biochemistry and Molecular Biology, University of Nevada, Reno; Rebecca L. Albion, Department of Biochemistry and Molecular Biology, University of Nevada, Reno; Karen A. Schlauch, Nevada Center for Bioinformatics, University of Nevada, Reno; Samuel M. D. Seaver, Argonne National Laboratory; John C. Cushman, Department of Biochemistry and Molecular Biology, University of Nevada, Reno

Evaluation of Flooding Tolerance in Echinochloa Species
Ji-Hoon Im, Seoul National University; Gyoungju Nah, Seoul National University; Do-Soon Kim, Seoul National University

A Comparative Genomic Study of the C3 Sugar Beet and the C4 Edible Grain Amaranth
Meeta Sunil, Institute of Bioinformatics and Applied Biotechnology; Nivedita Hariharan, Institute of Bioinformatics and Applied Biotechnology; Thejas Makam Shivakumar Gupta, Institute of Bioinformatics and Applied Biotechnology; Arjun Sreedhar, Institute of Bioinformatics and Applied Biotechnology; Keerthivasan Chandradoss Raanin, Institute of Bioinformatics and Applied Biotechnology; Savita Karthikeyan, Institute of Bioinformatics and Applied Biotechnology; Bibha Choudhary, Institute of Bioinformatics and Applied Biotechnology; Subhashini Srinivasan, Institute of Bioinformatics and Applied Biotechnology

Integrated Molecular and Morphological Studies of Daucus
Carlos Arbizu, Dept. Horticulture, University of Wisconsin-Madison; Holly Ruess, USDA Agricultural Research Service; Douglas Senalik, USDA-ARS; Phil Simon, USDA ARS and University of Wisconsin - Madison; Kathleen Reitsma, Iowa State University, North Central Regional Plant Introduction Station; David Spooner, USDA - ARS

Heritability and Genetic Basis of Top Size in Carrots (Daucus carota, L.)
Sarah D. Turner, University of Wisconsin-Madison; Philipp W. Simon, USDA-ARS and University of Wisconsin-Madison

Detecting and Characterizing the Highly Divergent Plastid Genome of the Nonphotosynthetic Hydnora visseri (Hydnoraceae)
Julia Naumann, TU Dresden, Chair for Botany; Joshua P. Der, California State University Fullerton; Loren Honaas, Penn State University; Eric Kenneth Wafula, Penn State University; Sarah T. Wagner, TU Dresden, Chair for Botany; Samuel S. Jones, Penn State University; Paula Ralph, Penn State University; Jay F. Bolin, Catawba College; Erika Maass, University of Namibia; Christoph Neinhuis, TU Dresden, Chair for Botany; Stefan Wanke, TU Dresden, Chair for Botany; Claude dePamphilis, Penn State University

Development of an EMS-Induced Sesame Mutant Population for Target Induced Local Lesions in Genomes (TILLING)
Ming Li Wang, USDA-ARS, PGRCU; Brandon Tonnis, USDA-ARS, PGRCU; David Pinnow, USDA-ARS, PGRCU; J. Bradly Morris, USDA-ARS, PGRCU; Gary A. Pederson, USDA-ARS, PGRCU

Comparative Exploration of Fern Genome Space
Joshua P. Der, California State University Fullerton; Emily Sessa, University of Florida; Blaine Marchant, University of Florida; Fay-Wei Li, Duke University; Carl J. Rothfels, University of British Columbia; Erin M. Sigel, Duke University; Jo Ann Banks, Purdue University; Matthew A Gitzendanner, University of Florida; Clayton J Visger, University of Florida; Douglas E. Soltis, University of Florida; Pamela S. Soltis, University of Florida; Kathleen M. Pryer, Duke University; Paul G. Wolf, Utah State University

Domestication of the Nitrogen Fixing Fern-Cyanobacteria Symbiosis Azolla for the Circular Economy
Paul Brouwer, Utrecht University; Adrie van der Werf, Plant Research International, Wageningen-UR; Laura Dijkhuizen, Utrecht University; Klaas G.J. Nierop, Utrecht University; Gert-Jan Reichert, Utrecht University; Bruno Huettel, Max Planck-Genome-centre Cologne; Canan Külahoglu, Heinrich Heine Universität Düsseldorf; Samantha Kurz, Heinrich Heine Universität Düsseldorf; Andreas PM Weber, Heinrich Heine Universität Düsseldorf; Sjef Smeekens, Utrecht University; Andrea Bräutigam, Heinrich Heine Universität Düsseldorf; Henriette Schluepmann, Utrecht University

Phylotranscriptomics of Ferns and Lycophytes, Two Key Lineages in Land-Plant Evolution
Shing H Zhan, University of British Columbia; Carl J. Rothfels, University of British Columbia; Zhenxiang Xi, Harvard University; Fay-Wei Li, Duke University; Emily Sessa, University of Florida; Michael S. Barker, University of Arizona; Joshua P. Der, California State University Fullerton; Markus Ruhsam, Royal Botanic Garden Edinburgh; Anders Larsson, Uppsala University; Dylan Burge, University of British Columbia; Lisa DeGironimo, New York Botanic Garden; Shona Ellis, University of British Columbia; Charles C Davis, Harvard University; Paul G. Wolf, Utah State University; Jim Leebens-Mack, University of Georgia; Michael Deyholos, University of British Columbia; Gane Ka-Shu Wong, Department of Biological Sciences, University of Alberta; Dennis Wm. Stevenson, New York Botanical Garden; Sean W Graham, University of British Columbia

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