SNP-Seek: the Largest Database of Rice Natural Variations.

SNP-Seek is the largest database of rice SNPs and short indels. It was built using NGS reads from 3024 rice genomes, mapped into five reference assemblies. It consists of more than 42 million SNPs and more than 3 million short indels. We have developed a user-friendly web interface to access this database and will discuss several use cases how SNP-Seek helps rice researchers.