3051
Aquaculture

This workshop will cover current research advances on development of molecular and genomics tools for aquaculture species, application of molecular genetics and genomics to selective breeding, application of genome editing in aquaculture, and selective breeding in commercial aquaculture populations.
Date: Saturday, January 9, 2016
Time: 8:00 AM-6:10 PM
Room: Royal Palm Salon 3-4
Organizer:
Mohamed Salem
8:00 AM
Introductory Remarks


8:05 AM
W033
Editing Fish Genome With CRISPR
Wenbiao Chen, Vanderbilt University School of Medicine

PDF file
8:45 AM
W034
Functional Studies in Atlantic Salmon (Salmo salar L.) Reveals Candidates for Sterility Vaccines
Anna Troedsson-Wargelius, Institute of Marine Research

9:05 AM
W035
Regulatory Approval of Genetically Engineered AquAdvantage Salmon
John Buchanan, Center for Aquaculture Technologies

9:25 AM
W036
Genomic Selection For Bacterial Cold Water Disease Resistance Reveals Large Within-Family Variation That Cannot Be Exploited In Traditional Family-based Selective Breeding In Rainbow Trout
Roger L. Vallejo, USDA-ARS-NCCCWA

PDF file
9:45 AM
W037
Weighted ssGBLUP Improves Genomic Selection Accuracy for Survival in a Rainbow Trout Population
Breno O. Fragomeni, University of Georgia

PDF file
10:05 AM
AM Break


10:20 AM
W038
Genome Scan for Selection Signatures in Atlantic Salmon Populations Using a High Density SNP Array
María Eugenia López Dinamarca, University of Chile

10:40 AM
W039
The vgll3 Locus Controls Age at Maturity in Wild and Domesticated Atlantic Salmon (Salmo salar L.) Males
Fernando Ayllon, Institute of Marine Research

11:00 AM
W040
Genome-Wide Association Study for Identifying Genome Loci That Affect Fillet Yield in Rainbow Trout (Oncorhynchus mykiss)
Dianelys Gonzalez-Pena, USDA-ARS-NCCCWA

11:20 AM
W041
A Genome-Wide Association Study for Low Oxygen Tolerance in Catfish using the 250K SNP Array
Xiaozhu Wang, Auburn University; The Fish Molecular Genetics and Biotechnology Laboratory

11:40 AM
W042
Candidate genes for ESC Disease Resistance of Catfish as Revealed by a Genome Wide Association Study
Tao Zhou, Auburn University

12:00 PM
Lunch Break


1:10 PM
W043
The Rainbow Trout Genome Provides Novel Insights into Evolution after Whole-Genome Duplication in Vertebrates
Yann Guiguen, INRA-SCRIBE

1:40 PM
W044
A New and Improved Rainbow Trout (Oncorhynchus mykiss) Reference Genome Assembly
Guangtu Gao, USDA-ARS-NCCCWA

PDF file
2:00 PM
W045
Progress of the Shrimp Genomic Sequencing Project
Jianhai Xiang, Institute of Oceanology, Chinese Academy of Sciences

2:20 PM
W046
Comparative Transcriptome Analysis of the Swimbladder Reveals Expression Signatures in Response to Hypoxia in Channel Catfish, Ictalurus punctatus
Qiang Fu, Auburn University; The Fish Molecular Genetics and Biotechnology Laboratory

2:40 PM
W047
The Catfish MicroRNAome: Identification, Annotation and Expression Profiling in Response to Bacterial Infections and Hypoxia Stress
Shikai Liu, Auburn University; The Fish Molecular Genetics and Biotechnology Laboratory

3:00 PM
PM Break


3:15 PM
W048
Genomics in Fish Breeding Programs for Developing Countries
John A.H. Benzie, WorldFish

3:45 PM
W049
Allelic-Imbalance Analysis in Pooled RNA-Seq Samples Identifies Muscle-Associated Genetic Markers in Rainbow Trout: Improved Bioinformatics Practices
Rafet Al-Tobasei, Middle Tennessee State University

4:05 PM
W050
Role of Long Non-Coding RNAs in Bacterial Cold Water Disease Pathogenesis in Rainbow Trout
Bam D Paneru, Middle Tennessee State University

4:25 PM
W051
Genotyping in Thousands By Sequencing (GT-seq): A Low Cost, High-Throughput, Targeted SNP Genotyping Method
Nathan Campbell, Columbia River Inter-Tribal Fish Commission

PDF file
4:45 PM
W052
Development of the Catfish 690K SNP Arrays for Analysis of Quantitative Traits
Qifan Zeng, Auburn University; The Fish Molecular Genetics and Biotechnology Laboratory; Qiang Fu, Auburn University; The Fish Molecular Genetics and Biotechnology Laboratory; Shikai Liu, Auburn University; The Fish Molecular Genetics and Biotechnology Laboratory; Yun Li, Auburn University; The Fish Molecular Genetics and Biotechnology Laboratory

5:05 PM
NRSP-8 Bioinformatics Coordinator


5:15 PM
Business Meeting


5:45 PM
Break


7:00 PM
Aquaculture reception and poster session


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