3127Managing Crop Phenotype Data
The final frontier for the application of plant genomics to plant improvement may be the acquisition and analysis of phenotype data for
the multigenic, environment-sensitive traits important for crops grown in the field. High-quality phenotype data remains expensive to produce, but its value is being leveraged by interpreting it in terms of associated genome-wide molecular marker alleles. This workshop will address the current status and plans for phenotype data input, organization, standards, querying, delivery, integration with genotype data, and analysis.
Date: Saturday, January 9, 2016
Time: 10:30 AM-12:40 PM
Room: Golden Ballroom
Organizers:
Clay Birkett
and
Jean-Luc Jannink
10:30 AM
Managing Phenotypic Data through Cassavabase with Fieldbook App
Alex C. Ogbonna, National Root Crops Research Institute (NRCRI);
Agbona Afolabi, International Institute of Tropical Agriculture (IITA);
Guillaume J. Bauchet, Boyce Thompson Institute for Plant Research;
Bryan Ellerbrock, Boyce Thompson Institute for Plant Research;
Naama Menda, Boyce Thompson Institute for Plant Research;
Chiedozie Egesi, National Root Crops Research Institute (NRCRI);
Adeyemi Olojede, National Root Crops Research Institute (NRCRI);
Ismail Rabbi, International Institute of Tropical Agriculture (IITA);
Peter Kulakow, International Institute of Tropical Agriculture (IITA);
Lukas Mueller, Boyce Thompson Institute for Plant Research
11:10 AM
GnpIS-Ephesis, the Phenotypic Data Integration Platform for Inra Networks Experimental Data – Data Discovery and Dataset Building Use Cases
Cyril Pommier, INRA - URGI;
Michael Alaux, INRA - URGI;
Thomas Letellier, INRA - URGI;
Célia Michotey, INRA - URGI;
Guillaume Cornut, INRA - URGI;
Aristide Lebreton, INRA - URGI;
Mathieu Labernadière, INRA - URGI;
Mathide Lainé, INRA - URGI;
Elizabeth Arnaud, Bioversity International;
Anne-Francoise Adam-Blondon, INRA - URGI;
Hadi Quesneville, INRA - URGI
