3164
SGN and RTB Databases: Genomics and Breeder Tools.

The Mueller lab develops databases for genomic and phenotypic data for the Solanaceae (SGN, Solgenomics.net), and root, tuber and banana (RTB) crops (Cassavabase.org, Yambase.org, Sweetpotatobase.org, Musabase.org). The lab also develops tools for data analysis and visualization. In this workshop, we will demo tools for accessing genomic data at SGN and breeder-friendly features implemented in the RTB databases. Biologists, breeders, and bioinformaticians interested in utilizing the data and tools on our databases, and exchanging experiences, ideas and co-developing tools will benefit from attending this workshop.
Date: Tuesday, January 12, 2016
Time: 10:30 AM-12:40 PM
Room: Towne - Meeting House
Organizers:
Isaak Y. Tecle and Lukas Mueller
10:30 AM
W830
Introduction to SGN and Genomics Tools
Lukas Mueller, Boyce Thompson Institute for Plant Research

PDF file
10:55 AM
W831
solGS: A Web-based Solution for Genomic Selection
Isaak Y. Tecle, Boyce Thompson Institute for Plant Research

PDF file
11:15 AM
W832
The Breeder Toolbox,  a Versatile Kit to Manage Phenotypes and Breeding Trials in Multiple Crops
Guillaume J. Bauchet, Boyce Thompson Institute for Plant Research; Isaak Y. Tecle, Boyce Thompson Institute for Plant Research; Naama Menda, Boyce Thompson Institute for Plant Research; Alex C. Ogbonna, National Root Crops Research Institute (NRCRI); Bryan Ellerbrock, Boyce Thompson Institute for Plant Research; Nicolas Morales, Boyce Thompson Institute for Plant Research; Lukas Mueller, Boyce Thompson Institute for Plant Research

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