Computer Demo 2

Talks and demonstrations about software and online resources for supporting and advancing research.
Date: Monday, January 11, 2016
Time: 12:50 PM-3:00 PM
Room: California
Organizers:
Dave Clements and Brian Smith-White
12:50 PM
C08
Mango: An Environment for Combining Massive Heterogeneous Networks
Jennifer Chang, Iowa State University; Hui-Hsien Chou, Iowa State University; Hyejin Cho, Iowa State University

1:10 PM
C09
Web Portal for Next Generation RNA-seq Sequence Computation and Analysis for Agricultural Animal Species
Weizhong Li, J Craig Venter Institute; Robert W. Li, ARS, USDA; Alexander Richter, J Craig Venter Institute

PDF file
1:30 PM
C10
Trimmomatic: A Flexible Trimmer for Illumina Sequence Data
Anthony Bolger, RWTH Aachen; Bjoern Usadel, Forschungzentrum Juelich & RWTH Aachen

1:50 PM
C12
Integrated, Accurate and Multi-Environment Structural Variation Discovery from Whole Genome Sequencing Data with NGSEP
Jorge A. Duitama Castellanos, International Center for Tropical Agriculture (CIAT); Juan Fernando De la Hoz, International Center for Tropical Agriculture (CIAT)

PDF file
2:10 PM
C13
Exploring Wheat Physical Maps and Genomic Data Using URGI Browsers
Thomas Letellier, INRA - URGI; Jane Rogers, International Wheat Genome Sequencing Consortium; Kellye Eversole, IWGSC; Frederic Choulet, INRA GDEC; Etienne Paux, INRA GDEC; Michael Alaux, INRA - URGI; Hadi Quesneville, INRA - URGI

PDF file
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