29
Genome Mapping, Tagging & Characterization: Rice

P0713
New Discoveries from Old Data: Exploiting the World's Largest Collection of Sequenced Germplasm through GWAS
Millicent D. Sanciangco, International Rice Research Institute; Nickolai Alexandrov, International Rice Research Institute; Grace Lee S. Capilit, International Rice Research Institute; Dmytro Chebotarov, International Rice Research Institute; N. Ruaraidh Sackville Hamilton, International Rice Research Institute; Venice Margarette Juanillas, International Rice Research Institute; Hei Leung, International Rice Research Institute; Locedie A. Mansueto, International Rice Research Institute; Ramil P. Mauleon, International Rice Research Institute; Sheila Mae Q. Mercado, International Rice Research Institute; Maria Elizabeth B. Naredo, International Rice Research Institute; Renato A. Reaño, International Rice Research Institute; Victor J. Ulat, International Rice Research Institute; Kenneth L. McNally, International Rice Research Institute

P0714
Rice Whole-Genome SNP Arrays (Rice6K, Rice60K, Rice90K) for Genomic Research and Breeding
Huihui Yu, Life Science and Technology Center of China Seed; Haodong Chen, Peking-Yale Joint Center for Plant Molecular Genetics and Agro-biotechnology, State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Peking University; Weibo Xie, Huazhong Agricultural University; Hang He, Peking-Yale Joint Center for Plant Molecular Genetics and Agro-biotechnology, State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Peking University; Xiaoyan Tang, Shenzhen Institute of Crop Molecular Design; Fasong Zhou, Life Science and Technology Center of China Seed; Xingwang Deng, Peking-Yale Joint Center for Plant Molecular Genetics and Agro-biotechnology, State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Peking University; Qifa Zhang, Huazhong Agricultural University

P0715
Breeding Signatures of Rice Improvement Revealed by a Genomic Variation Map from a Large Germplasm Collection
Weibo Xie, Huazhong Agricultural University; Gongwei Wang, Huazhong Agricultural University; Xingming Lian, Huazhong Agricultural University; Qifa Zhang, Huazhong Agricultural University

P0716
Implementing Genomic Selection in a temperate Rice Breeding Program
Eliana Monteverde, Cornell University; Pedro Blanco, National Institute of Agricultural Research (INIA); Victoria Bonnecarrere, INIA-Las Brujas; Lucia Gutierrez, University of Wisconsin - Madison; Juan Rosas, INIA-Treinta y Tres; Gaston Quero, College of Agriculture - UDELAR; Natalia Berberián, Facultad de Agronomía, Universidad de la República; Silvia Garaycochea, INIA-Las Brujas; Schubert Fernandez, National Institute of Agricultural Research (INIA); Susan McCouch, Cornell University

P0717
Rice Chloroplast Genome Variation, Diversity and Phylogenetic Dissection in Diverse Oryza Species Suggested By Whole Genome Resequencing
Wei Tong, Kongju National University; Tae-Sung Kim, Kongju National University; Yong-Jin Park, Kongju National University

P0718
Use of DArT-seq Markers to Study Genetic Diversity in Japanese Rice Accessions
Vanessa Rizzi, University of São Paulo; Diane Simon Rozzetto, University of São Paulo; João Paulo Gomes Viana, University of Campinas; José Baldin Pinheiro, University of São Paulo

P0719
Novel Green Tissue-Specific Synthetic Promoters and cis-Regulatory Elements in Rice
Rui Wang, Huazhong Agricultural University; Fei Zhou, National Key Laboratory of Crop Genetic Improvement and National Centre of Plant Gene Research, Huazhong Agricultural University; Yongjun Lin, National Key Laboratory of Crop Genetic Improvement and National Centre of Plant Gene Research, Huazhong Agricultural University

P0720
Exploring and Comparing Plant Genomes Using the Gramene/Ensembl Plants Browser
Joshua Stein, Cold Spring Harbor Laboratory; Sharon Wei, Cold Spring Harbor Laboratory; Marcela Karey Tello-Ruiz, Cold Spring Harbor Laboratory; Andrew Olson, Cold Spring Harbor Laboratory; Sunita Kumari, Cold Spring Harbor Laboratory; Joseph Mulvaney, Cold Spring Harbor Laboratory; Jim Thomason, Cold Spring Harbor Laboratory; Dan Bolser, EMBL - The European Bioinformatics Institute; Arnaud Kerhornou, EMBL - The European Bioinformatics Institute; Paul J. Kersey, EMBL - The European Bioinformatics Institute; Doreen Ware, Cold Spring Harbor Laboratory/USDA-ARS

P0721
Building a Reference Genome for Indica Rice
Chengzhi Liang, Institute of Genetics and Developmental Biology, CAS; Huilong Du, Institute of Genetics and Developmental Biology, CAS; Bin Ma, Institute of Genetics and Developmental Biology, CAS; Ying Yu, Institute of Genetics and Developmental Biology, CAS; Shigui Li, Sichuan Agricultural University

P0722
Towards a Fully Indexed Mutant Population in the Model Rice, Kitaake, Suited for Forward and Reverse Genetics Research
Mawsheng Chern, UC Davis/JBEI; Rashmi Jain, UC Davis/JBEI; Zhongchen Zhang, UC Davis; Guotian Li, UC Davis/JBEI; Pamela Ronald, UC Davis/JBEI

P0723
Computational and Statistical Methods for Population Genomics
Christopher A. Fragoso, Yale University; Christopher Heffelfinger, Yale University; Maria A. Moreno, Yale University; Alexander Aguirre, International Center for Tropical Agriculture; Natalia Franco-Herrera, International Center for Tropical Agriculture; Luz Elena Romero, International Center for Tropical Agriculture; Hongyu Zhao, Yale University; Stephen Dellaporta, Yale University; Mathias Lorieux, IRD and CIAT

P0724
Genetical Process of the Establishment of Rice Local Population
Kenji Fujino, National Agriculture and Food Research Organization

P0725
Developmental Mechanisms of Seed Dormancy Revealed by Map-Based Cloning of a Major Quantitative Trait Locus from Rice (Oryza sativa)
Jiuhuan Feng, South Dakota State University; Heng Ye, South Dakota State University; Xing-you Gu, South Dakota State University

P0726
Identification of Responsible Genes Involved in Awn Development and Discussion about Rice Domestication Process
Kanako Uehara, Nagoya University

P0727
Characterization and Fine Mapping of the Early Senescence Mutant esls in Rice
Dongryung Lee, Seoul National University; Hee-Jong Koh, Seoul National University

P0728
High-Density Mapping Reveals a Linkage of Quantitative Trait Loci for Grain-Weight and Spikelet Number in Rice
Sang-Nag Ahn, Dept. of Agronomy, Chungnam National University; Dong-Min Kim, Seed Testing and Research Center, Korea Seed and Variety Service; Hyun-Sook Lee, Dept. of Agronomy, Chungnam National University; Ju-Won Kang, Dept. of Agronomy, Chungnam National University; Yeo-Tae Yun, Chungnam Agricultural Research and Extension Services

P0729
Characterization and Fine Mapping of Hsph Controlling the Split Hull Character in Rice
Gileung Lee, Seoul National University; Hee-Jong Koh, Seoul National University

P0730
Rice PCR1 Influences Grain Weight and Zn Accumulation in Grains
Won-Yong Song, Pohang University of Science and Technology; Hyun-Sook Lee, Dept. of Agronomy, Chungnam National University; Sang-Nag Ahn, Dept. of Agronomy, Chungnam National University; Gynheung An, Kyung Hee University; Youngsook Lee, Pohang University of Science and Technology

P0731
Genetic Control of Inflorescence Architecture during Rice Domestication
Zuofeng Zhu, China Agricultural University; Chuanqing Sun, China Agricultural University

P0732
QTL Analysis of White Core Grain in a Rice Cultivar, “Yamadanishiki” for Brewing Japanese Rice Wine
Satoshi Okada, Food Resources Education and Research Center, Graduate School of Agricultural Science, Kobe University; Kiyosumi Hori, Agrogenomics Research Center, National Institute of Agrobiological Sciences; Kaworu Ebana, Agrogenomics Research Center, National Institute of Agrobiological Sciences; Akio Onogi, Department of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo; Hiroyoshi Iwata, Department of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo; Masanori Yamasaki, Food Resources Education and Research Center, Graduate School of Agricultural Science, Kobe University

P0733
New SNP-Based Markers for Grain Chalk in Rice Identified By Whole Genome Sequencing and Selective Genotyping
Manuel Esguerra, SPESS-LSU AgCenter; James Oard, SPESS-LSU AgCenter; Steve Linscombe, Rice Research Station - LSU AgCenter

P0734
Exploring the Rice Dispensable Genome Using a Metagenome-like Assembly Strategy
Weibo Xie, Huazhong Agricultural University; Wen Yao, Huazhong Agricultural University

P0735
Detection of a New Genetic Locus of Rice Floury Mutant Using Whole Genome Re-Sequencing
Soon Wook Kwon, Pusan University; Ji-Ung Jeung, National Institute of Crop Science, RDA

P0736
Comparative Analysis of the Structure, Organization, Evolution and Expression Profiles of Genes Encoding ADP-Ribosylation Factors in the C3 Model, Rice and a C4 Model, Foxtail Millet
Muthamilarasan Mehanathan, Louisiana State University; Venkata R. Mangu, Louisiana State University; Hana Zandkarimi, Louisiana State University; Manoj Prasad, National Institute of Plant Genome Research; Niranjan Baisakh, Louisiana State University

P0737
RNase ZS1 Mediates UbL40 mRNAs Decay Controlling Thermo-Sensitive Genic Male Sterility in Rice
Hai Zhou, State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources; College of Life Sciences, South China Agricultural University; Jing Li, State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources; College of Life Sciences, South China Agricultural University; Liya Zhu, State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources; College of Life Sciences, South China Agricultural University; Dagang Jiang, State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources; College of Life Sciences, South China Agricultural University; Jingfang Dong, State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources; College of Life Sciences, South China Agricultural University; Qinjian Liu, State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources; College of Life Sciences, South China Agricultural University; Lingyan Zhou, State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources; College of Life Sciences, South China Agricultural University; Erdong Ni, State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources; College of Life Sciences, South China Agricultural University; Zhenlan Liu, State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources; College of Life Sciences, South China Agricultural University; Yaoguang Liu, State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources; College of Life Sciences, South China Agricultural University; Chuxiong Zhuang, State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources; College of Life Sciences, South China Agricultural University

P0738
A Genome-Wide Association Study Reveals Candidate Genes Related to Salt Tolerance of Rice (Oryza sativa) at the Germination Stage
Jie Yu, Kongju National University; Wei Tong, Kongju National University; Qiang He, Kongju National University; Min-Young Yoon, Kongju National University; Won-Hee Ra, Kongju National University; Feng-Peng Li, Kongju National University; Win Htet Oo, Kongju National University; Bu-Woong Choi, Kongju National University; Eun-Beom Heo, Kongju National University; Kyu-Won Kim, Kongju National University; Tae-Sung Kim, Kongju National University; Yong-Jin Park, Kongju National University

P0739
Genetic and Functional Analysis of Heavy Ion Induced Rice CEF1 Gene
Yafeng Ye, Institute of Technical Biology and Agriculture Engineering, Hefei Institutes of Physical Science, Chinese Academy of Sciences; Binmei Liu, Key Laboratory of Ion Beam Bioengineering, Institutes of Physical Science, Chinese Academy of Sciences; Xiang dong FU, State Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China; Yuejin Wu, Hefei Institute of Material Science, Chinese Academy of Sciences

P0741
Developing Herbicide-Resistant Rice with Novel Genes
Ying Cui, National Key Laboratory of Crop Genetic Improvement and National Center of Plant Gene Research, Huazhong Agricultural University; Shuyuan Yi, State Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University; Ziduo Liu, State Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University; Hao Chen, National Key Laboratory of Crop Genetic Improvement and National Center of Plant Gene Research, Huazhong Agricultural University; Fei Zhou, National Key Laboratory of Crop Genetic Improvement and National Center of Plant Gene Research, Huazhong Agricultural University; Yongjun Lin, National Key Laboratory of Crop Genetic Improvement and National Center of Plant Gene Research, Huazhong Agricultural University

P1290
Automated High-Throughput Phenotyping to Study Salinity Tolerance in Rice
Nadia Al-Tamimi, King Abdullah University of Science and Tecnology; Bettina Berger, University of Adelaide; Chris Brien, University of South Australia; Stephanie Saade, King Abdullah University of Science and Tecnology; Helena Oakey, King Abdullah University of Science and Tecnology; Yung Shwen Ho, King Abdullah University of Science and Tecnology; Sandra M Schmoeckel, King Abdullah University of Science and Technology; Mark Tester, King Abdullah University of Science and Technology (KAUST); Sónia Negrão, King Abdullah University of Science and Technology (KAUST)

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