15
Bioinformatics: Databases

P0322
The Agronomic Linked Data (AgroLD) Project
Pierre Larmande, IRD, UMR DIADE, Institut de Biologie Computationnelle; Manuel Ruiz, CIRAD, UMR AGAP / CIAT; Nordine El Hassouni, INRA; Aravind Venkatesan, Institut de Biologie Computationnelle

P0323
Planteome: Reference Ontologies and a Platform for Integrative Plant Genomics
Austin Meier, Oregon State University; Laurel Cooper, Department of Botany & Plant Pathology, Oregon State University; Pankaj Jaiswal, Department of Botany & Plant Pathology, Oregon State University; Barry Smith, University at Buffalo; Christopher Mungall, Lawrence Berkeley National Laboratory; Marie-Angélique Laporte, Bioversity International; Elizabeth Arnaud, Bioversity International; Justin L. Elser, Department of Botany & Plant Pathology, Oregon State University; Justin Preece, Department of Botany & Plant Pathology, Oregon State University; Sinisa Todorovic, Oregon State University; Eugene Zhang, Oregon State University

P0324
Knowledge.Bio: A Web Application for Collaboratively Building and Exploring Networks of Biological Relationships
Richard Michael Bruskiewich, STAR Informatics / Delphinai Corporation; Kenneth Casimir Huellas-Bruskiewicz, Simon Fraser University; Chandan Kumar Mishra, Simon Fraser University; Farzin Ahmed, Simon Fraser University; Yinglun Colin Qiao, Simon Fraser University; Jarielle D Lim, Simon Fraser University; Lance Hannestad, Simon Fraser University; Rudy Kong Tin Lun, Simon Fraser University; Benjamin M Good, The Scripps Research Institute

P0325
What's New at Araport
Agnes P. Chan, J. Craig Venter Institute

P0326
The de.NBI-GCBN Service Centre – A Crop BioGreenformatics Network
Thomas Schmutzer, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben; Marie E Bolger, IBG-2, Forschungszentrum Jülich; Jinbo Chen, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben; Heidrun Gundlach, PGSB - Plant Genome and Systems Biology, Helmholtz Center Munich, German Research Center for Environmental Health (GmbH); Markus Oppermann, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben; Stephan Weise, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben; Matthias Lange, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben; Manuel Spannagl, PGSB - Plant Genome and Systems Biology, Helmholtz Center Munich, German Research Center for Environmental Health (GmbH); Bjoern Usadel, Forschungzentrum Juelich & RWTH Aachen; Klaus F.X. Mayer, PGSB - Plant Genome and Systems Biology, Helmholtz Center Munich, German Research Center for Environmental Health (GmbH); Uwe Scholz, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben

P0327
Plant Genome Database Japan (PGDBj) in 2017: A Research Infrastructure for Genomics and Genetics of Plants
Akihiro Nakaya, Graduate School of Medicine, Osaka University; Hideki Hirakawa, Kazusa DNA Research Institute; Hisako Ichihara, Kazusa DNA Research Institute; Taeko Shibaya, Kazusa DNA Research Institute; Erika Asamizu, Ryukoku University; Sachiko Shirasawa, Kazusa DNA Research Institute; Yasukazu Nakamura, Kazusa DNA Research Institute; Satoshi Tabata, Kazusa DNA Research Institute

P0328
NBRP-Plant Databases: Plant Biological Resource Databases in Japan
Haruka Kouyama, National Institute of Genetics; Masatomo Kobayashi, RIKEN BioResource Center; Yutaka Sato, National Institute of Genetics; Shuhei Nasuda, Graduate School of Agriculture, Kyoto University; Kazuhiro Sato, IPSR, Okayama University; Masanobu Kawachi, National Institute for Environmental Studies; Makoto Kusaba, Hiroshima University; Eiji Nitasaka, Kyushu University; Ryo Akashi, University of Miyazaki; Hiroshi Ezura, University of Tsukuba; Rie Tsuchiya, National Institute of Genetics; Gaku Kimura, National Institute of Genetics; Yukiko Yamazaki, National Institute of Genetics

P0329
DBCLS SRA: Integrated Search of Public NGS Database, the Sequence Read Archive (SRA), and Its Relevant Databases
Takeru Nakazato, Database Center for Life Science; Tazro Ohta, Database Center for Life Science; Hidemasa Bono, Database Center for Life Science

P0330
DNAPOD: Implementation of Virtual Machine for DNAPOD Workflow and Genotype Imputation
Takako Mochizuki, Genome Informatics Laboratory, NIG, ROIS; Hiromi Kajiya-Kanegae, The University of Tokyo; Yasuhiro Tanizawa, Genome Informatics Laboratory, NIG, ROIS; Takatomo Fujisawa, Genome Informatics Laboratory, NIG, ROIS; Tazro Ohta, Database Center for Life Science, ROIS; Naruo Nikoh, Liberal Arts, OUJ; Tokurou Shimizu, Division of Citrus Research, Institute of Fruit Tree and Tea Science, NARO; Atsushi Toyoda, Advanced Genomics Center, NIG, ROIS; Asao Fujiyama, Advanced Genomics Center, NIG, ROIS; Nori Kurata, NIG, ROIS; Hideki Nagasaki, Genome Informatics Group, Department of Technology Development, Kazusa DNA Research Institute; Hiroyoshi Iwata, The University of Tokyo; Eli Kaminuma, Genome Informatics Laboratory, NIG, ROIS; Yasukazu Nakamura, Genome Informatics Laboratory, NIG, ROIS

P0331
AgBioData: A Consortium of Agricultural Biological Databases
Jacqueline D. Campbell, Iowa State University; Ethalinda Cannon, Iowa State University; Sook Jung, Washington State University; Dorrie Main, Washington State University; Monica Poelchau, USDA/Agricultural Resarch Service/National Agricultural Library; Ramona Walls, University of Arizona; Lisa C Harper, USDA-ARS

P0332
Plant Gene Expression in EMBL-EBI Expression Atlas
Maria Keays, European Bioinformatics Institute (EMBL-EBI)

P0333
TransAtlasDB - an Informatics System for Transcriptome Analysis Data
Modupeore Adetunji, University of Delaware; Carl J. Schmidt, University of Delaware

P0334
Efficient Integration of Phytozome Population Diversity and Expression Data with JBrowse
Richard D Hayes, DOE Joint Genome Institute; Joseph W. Carlson, DOE Joint Genome Institute; David M. Goodstein, DOE Joint Genome Institute; Daniel S. Rokhsar, DOE Joint Genome Institute

P0335
Towards Comprehensive Coverage and Annotation of Proteome Space
Ramona Britto, EMBL-EBI

P0336
CATchUP: A Web Database for Spatiotemporally Expressed Genes
Yukino Nakamura, School of Agriculture, Meiji University; Toru Kudo, School of Agriculture, Meiji University; Shin Terashima, School of Agriculture, Meiji University; Misa Saito, School of Agriculture, Meiji University; Eiji Nambara, Dept. of Cell & Systems Biology., University of Toronto; Kentaro Yano, School of Agriculture, Meiji University

P0337
Bio-TDS : BioQuery Tool Discovery System
Carol Lushbough, University of South Dakota; Michael Gonzales, University of Georgia; Ann Stapleton, University of North Carolina - Wilmington; Etienne Gnimpieba, University of South Dakota; Susan Cato, American Society of Plant Biologists

P0338
RefEx, a Reference Gene Expression Dataset As a Web Tool for the Functional Analysis of Genes
Hiromasa Ono, Database Center for Life Science; Hidemasa Bono, Database Center for Life Science

P0339
ORCAE: Online Resource for Community Annotation of Eukaryotes
Lieven Sterck, VIB Ghent University, Department of Plant Biotechnology and Bioinformatics; Thomas Van Parys, VIB-UGent; Stephane Rombauts, VIB Ghent University, Department of Plant Biotechnology and Bioinformatics; Yves Van de Peer, VIB Ghent University, Department of Plant Biotechnology and Bioinformatics

P0340
PIECE 2.0: An Update for the Plant Gene Structure Comparison and Evolution Database
Yong Q. Gu, USDA ARS, Western Regional Research Center; Yi Wang, USDA ARS, Western Regional Research Center; Ling Xu, Plant Gene Expression Center, USDA-ARS; Roger Thilmony, USDA-ARS; Frank M. You, Agriculture and Agri-Food Canada; Devin Coleman-Derr, Plant Gene Expression Center, USDA-ARS

P0341
Degree of Variations in Plant Genomes
Micheal O Adeboye, POSTGRADUATE SCHOOL,UNIVERSITY OF IBADAN,NIGERIA

P0342
Gene Family Construction and Analysis in Phytozome
Jeremy L. Phillips, DOE Joint Genome Institute; Joseph W. Carlson, DOE Joint Genome Institute; David M. Goodstein, DOE Joint Genome Institute; Daniel S. Rokhsar, DOE Joint Genome Institute

P0343
The Bio-Analytic Resource for Plant Biology
Asher Pasha, University of Toronto / CAGEF; Jamie Waese, University of Toronto / CAGEF; Jim Fan, University of Waterloo; Zhenming Yu, University of Toronto / CAGEF; Matthew Ierullo, University of Toronto / CAGEF; Rohan V. Patel, University of Toronto / CAGEF; Priyank K. Purohit, University of Toronto / CAGEF; Sylva Donaldson, University of Toronto / CAGEF; Adrian Platts, McGill University; Mathieu Blanchette, McGill University; Stephen I. Wright, University of Toronto; Nicholas Provart, University of Toronto / CAGEF

P0344
Overview of Gramene
Marcela Karey Tello-Ruiz, Cold Spring Harbor Laboratory

P0345
The First Phase of a Comprehensive Genetic Analyzing Platform for Rice: Establishment of an Integrated Genotype Database of Diverse Rice Genetic Resources
Sheng-Kai Hsu, National Taiwan University; Chih-Wei Tung, National Taiwan University

P0346
SNP-Seek Resource for Rice Research
Locedie Mansueto, International Rice Research Institute; Roven Rommel Fuentes, International Rice Research Institute; Nikki Borja, International Rice Research Institute; Jeffrey Detras, International Rice Research Institute; Juan Miguel Abriol-Santos, International Rice Research Institute; Dmytro Chebotarov, International Rice Research Institute; Millicent D. Sanciangco, International Rice Research Institute; N. Ruaraidh Sackville Hamilton, International Rice Research Institute; Ramil P. Mauleon, International Rice Research Institute; Kenneth L. McNally, International Rice Research Institute; Nickolai Alexandrov, International Rice Research Institute

P0347
MaizeGDB: New Resources for Maize Researchers
John Portwood, USDA-ARS Corn Insects and Crop Genetics Research Unit, Iowa State University; Ethalinda Cannon, Iowa State University; Jesse R. Walsh, Iowa State University; Lisa C Harper, USDA-ARS; Maggie Woodhouse, University of California - Davis; Jack Gardiner, Department of Genetics, Cellular, and Developmental Biology; Mary Schaeffer, USDA ARS and University of Missouri; Bremen M Braun, MaizeGDB; Kyoung Tak Cho, Iowa State University; David Schott, Iowa State University; Taner Z. Sen, USDA -ARS / GrainGenes; Carson M Andorf, USDA-ARS Corn Insects and Crop Genetics Research Unit, Iowa State University

P0348
The Gene Pages at MaizeGDB
Ethalinda Cannon, Iowa State University; Susan Belcher, University of Oregon; Jack Gardiner, University of Missouri; Lisa Harper, USDA-ARS Corn Insects and Crop Genetics Research; John Portwood, USDA-ARS Corn Insects and Crop Genetics Research Unit, Iowa State University; Mary Schaeffer, USDA ARS and University of Missouri; Maggie Woodhouse, University of California - Davis; Carson M Andorf, USDA-ARS Corn Insects and Crop Genetics Research Unit, Iowa State University

P0349
Curation and Outreach at GrainGenes
Sarah Odell, USDA-ARS; Gerard R. Lazo, USDA Agricultural Research Service, WRRC; David Hane, USDA-ARS-WRRC; Yong Q. Gu, USDA ARS, Western Regional Research Center; Taner Z. Sen, USDA -ARS / GrainGenes

P0350
A Gene Nomenclature for the Triticeae Tribe
Bruno A Santos, NIAB; Paul J. Kersey, EMBL - The European Bioinformatics Institute; Manuel Spannagl, PGSB - Plant Genome and Systems Biology, Helmholtz Center Munich, German Research Center for Environmental Health (GmbH); John Rogers, UNICEN; Craig F. Morris, USDA-ARS Western Wheat Quality Lab; Tatsuya M. Ikeda, NARO, Western Region Agricultural Research Center; Thomas Letellier, URGI; Heidrun Gundlach, PGSB - Plant Genome and Systems Biology, Helmholtz Center Munich, German Research Center for Environmental Health (GmbH); Sven O. Twardziok, PGSB - Plant Genome and Systems Biology, Helmholtz Center Munich, German Research Center for Environmental Health (GmbH); Carlos Guzmán, CIMMYT; Mario J Caccamo, NIAB

P0351
LegumeInfo.org: Legume Research and Trait Data That Is Findable, Accessible, Interoperable and Re-Usable
Jacqueline D. Campbell, Iowa State University; Joel Berendzen, National Center for Genome Resources (NCGR); Ethalinda Cannon, Iowa State University; Alan M. Cleary, National Center for Genome Resources (NCGR); Sudhansu Dash, National Center for Genome Resources (NCGR); Sam Hokin, National Center for Genome Resources (NCGR); Wei Huang, Iowa State University; Alex G. Rice, National Center for Genome Resources (NCGR); Pooja E. Umale, National Center for Genome Resources (NCGR); Nathan T. Weeks, USDA-ARS-CICGRU; Andrew Wilkey, USDA-ARS-CICGRU; Andrew Farmer, National Center for Genome Resources (NCGR); Steven B. Cannon, USDA-ARS-CICGRU; Maria Hadres, National Center for Genome Resources (NCGR)

P0352
Integrating Genetic with Genomic Data in Legume InterMines
Sam Hokin, National Center for Genome Resources (NCGR); Andrew Farmer, National Center for Genome Resources (NCGR); Vivek Krishnakumar, J. Craig Venter Institute

P0353
The Federated Plant Database Initiative for the Legumes
Steven B. Cannon, USDA-ARS-CICGRU; Jacqueline D. Campbell, Iowa State University; Sudhansu Dash, National Center for Genome Resources (NCGR); Wei Huang, Iowa State University; Akshay Yadav, Iowa State University; Nathan T. Weeks, USDA-ARS-CICGRU; Andrew Wilkey, USDA-ARS-CICGRU; Prateek Gupta, Iowa State University; Shivan Gunda, Iowa State University; Maria Hadres, National Center for Genome Resources (NCGR); Joel Berendzen, National Center for Genome Resources (NCGR); Sam Hokin, National Center for Genome Resources (NCGR); Vivek Krishnakumar, J. Craig Venter Institute; Agnes P. Chan, J. Craig Venter Institute; Ethalinda Cannon, Iowa State University; Eric Lyons, University of Arizona; Andrew Farmer, National Center for Genome Resources (NCGR); Christopher D. Town, J. Craig Venter Institute; David Fernandez-Baca, Iowa State University

P0354
Annotating Genomes, Assessing Quality, and Downloading Data
Francoise Thibaud-Nissen, National Center for Biotechnology Information (NCBI/NLM/NIH); the Eukaryotic Genome Annotation Team, NCBI/NLM/NIH

P0355
Alfalfa Breeder’s Toolbox (ABT): An Integrated Database for Alfalfa Genomics, Genetics and Breeding
Maria J. Monteros, Noble Research Institute; Chunlin He, The Samuel Roberts Noble Foundation; Jaeyoung Choi, The Samuel Roberts Noble Foundation; Patrick Xuechun Zhao, The Samuel Roberts Noble Foundation; Perdeep Mehta, Noble Research Institute; Xinbin Dai, The Samuel Roberts Noble Foundation; Junil Chang, Noble Research Institute, LLC; Nick Krom, The Samuel Roberts Noble Foundation; Nadim Tayeh, The Samuel Roberts Noble Foundation; Michael Trammell, The Samuel Roberts Noble Foundation; Christy Motes, The Samuel Roberts Noble Foundation; Alyssa Nedley, The Samuel Roberts Noble Foundation

P0356
PeanutBase.org: A Genomic and Genetic Data Resource to Support Crop Improvement in Peanut
Wei Huang, Iowa State University; Sudhansu Dash, National Center for Genome Resources (NCGR); Alan M. Cleary, National Center for Genome Resources (NCGR); Alex G. Rice, National Center for Genome Resources (NCGR); Sam Hokin, National Center for Genome Resources (NCGR); Jacqueline D. Campbell, Iowa State University; Joel Berendzen, National Center for Genome Resources (NCGR); Maria Hadres, National Center for Genome Resources (NCGR); Pooja E. Umale, National Center for Genome Resources (NCGR); Nathan T. Weeks, USDA-ARS-CICGRU; Andrew Wilkey, USDA-ARS-CICGRU; Andrew Farmer, National Center for Genome Resources (NCGR); Steven B. Cannon, USDA-ARS-CICGRU; Ethalinda Cannon, Iowa State University

P0357
CottonGen: An Up-to-Date Resource Enabling Genetics, Genomics and Breeding Research for Crop Improvement
Jing Yu, Washington State University; Sook Jung, Washington State University; Chun-Huai Cheng, Washington State University; Taein Lee, Washington State University; Ping Zheng, Washington State University; Jodi L. Humann, Washington State University; Deah McGaughey, Washington State University; Morgan Frank, Washington State University; Heidi Hough, Washington State University; B. Todd Campbell, USDA-ARS; Richard G. Percy, USDA-ARS, Southern Plains Agricultural Research Center; Don C. Jones, Cotton Incorporated; Dorrie Main, Washington State University

P0358
TreeGenes and CartograTree: Genetic and Genomic Resources for Forest Trees
Emily Grau, University of Connecticut; Nic Herndon, University of Connecticut; Steven A Demurjian Jr, University of Connecticut; Qiaoshan Lin, University of Connecticut; Michael Wynne, University of Connecticut; Damian Gessler, University of Arizona; Alex Feltus, Genetics & Biochemistry, Clemson University; Margaret Staton, University of Tennessee, Knoxville; Stephen P. Ficklin, Washington State University; Dorrie Main, Washington State University; Jill L. Wegrzyn, Department of Ecology and Evolutionary Biology - University of Connecticut

P0359
Gymno-PLAZA: An Access Point for Comparative Genomics in Conifer Species
Lieven Sterck, VIB Ghent University, Department of Plant Biotechnology and Bioinformatics; Klaas Vandepoele, Department of Plant Systems Biology, VIB; Zhen Li, VIB-UGent; Yves Van de Peer, VIB Ghent University, Department of Plant Biotechnology and Bioinformatics

P0360
TreeGenes: Genetic and Genomic Resources for Forest Trees
Emily Grau, University of Connecticut; Nic Herndon, University of Connecticut; Steven A Demurjian Jr, University of Connecticut; Qiaoshan Lin, University of Connecticut; Michael Wynne, University of Connecticut; Damian Gessler, University of Arizona; Alex Feltus, Genetics & Biochemistry, Clemson University; Margaret Staton, University of Tennessee, Knoxville; Stephen P. Ficklin, Washington State University; Dorrie Main, Washington State University; Jill L. Wegrzyn, Department of Ecology and Evolutionary Biology - University of Connecticut

P0361
Introducing the Brassica Information Portal: Towards Integrating Genotypic and Phenotypic Brassica Crop Data
Annemarie Eckes, Earlham Institute; Tomasz Gubala, Earlham Institute; Piotr Nowakowski, Earlham Institute; Tomasz Szymczyszyn, Earlham Institute; Rachel Wells, John Innes Centre; Thomas Alcock, University of Nottingham; Judith Irwin, John Innes Centre; Graham J. King, Southern Cross Plant Science, Southern Cross University; Ian Bancroft, Department of Biology, University of York; Wiktor Jurkowski, Earlham Institute

P0362
Novel Database for TF Clone and TAC Clone of Arabidopsis thaliana in RIKEN BRC
Satoshi Iuchi, RIKEN Bioresource Center; Masatosmo Kobayashi, RIKEN Bioresource Center

P0363
Prediction of Gene Structures Using Public Sequencing Data of RNA-Seq and cDNA in Solanum lycopersicum
Toru Kudo, School of Agri., Meiji University; Masaaki Kobayashi, School of Agri., Meiji University; Shin Terashima, School of Agri., Meiji University; Minami Katayama, School of Agri., Meiji University; Misa Saito, School of Agri., Meiji University; Maasa Kanno, School of Agri., Meiji University; Koji Yokoyama, School of Agri., Meiji University; Hajime Ohyanagi, King Abdullah University of Science and Technology; Kentaro Yano, School of Agri., Meiji University

P0364
Resources for Comparative Genomics and Pathway Analysis for Grapevine
Sushma Naithani, Department of Botany & Plant Pathology, Oregon State University; Justin Preece, Department of Botany & Plant Pathology, Oregon State University; Parul Gupta, Department of Botany & Plant Pathology, Oregon State University; Peter D'Eustachio, NYU School of Medicine; Justin L. Elser, Department of Botany & Plant Pathology, Oregon State University; Sharon Wei, Cold Spring Harbor Laboratory; Robert Petryszak, EMBL-EBI; Paul J. Kersey, EMBL - The European Bioinformatics Institute; Lincoln Stein, Ontario Institute of Cancer Research; Doreen Ware, Cold Spring Harbor Laboratory; Pankaj Jaiswal, Department of Botany & Plant Pathology, Oregon State University

P0365
Exploring Grapevine Gene Expression Patterns with VESPUCCI
Marco Moretto, Fondazione Edmund Mach; Paolo Sonego, Fondazione Edmund Mach; Stefania Pilati, Fondazione Edmund Mach; Giulia Malacarne, Fondazione Edmund Mach; Laura Costantini, Fondazione Edmund Mach; Lukasz Grzeskowiak, Fondazione Edmund Mach; Giorgia Bagagli, Fondazione Edmund Mach; Claudio Moser, Fondazione Edmund Mach; M. Stella Grando, Fondazione Edmund Mach; Kristof Engelen, Fondazione Edmund Mach

P0366
Web Database for Molecular Breeding and Resource Management in Vitis Crop
Sung-Hwan Jo, SEEDERS Inc.; Bong-Woo Lee, SEEDERS Inc.; Jeong-Hee Lee, SEEDERS Inc.; Sangmi Kim, SEEDERS Inc.; Whan Cho, SEEDERS Inc.; Kang Hee Cho, National Institute of Horticultural and Herbal Science

P0367
MoccaDB 2.0, an Interactive Coffee SNP Database
Manon Coulee, IRD; Michel Rigoreau, Nestle; Rémi Tournebize, IRD; Dominique Crouzillat, Nestle; Alexandre de Kochko, IRD UMR DIADE; Valerie Poncet, IRD UMR DIADE; Christine Tranchant-Dubreuil, IRD - UMR DIADE

P0368
Systems Biology Resources for the Citrusgreening Disease Complex
Mirella Flores-Gonzalez, Boyce Thompson Institute; Surya Saha, Boyce Thompson Institute; Prashant S Hosmani, Boyce Thompson Institute; Susan Brown, Kansas State University, KSU Bioinformatics Center; Lukas Mueller, Boyce Thompson Institute

P0369
Citrus Genome Database (CGD): A Resource for Genomics, Genetics, and Breeding Research
Julia Piaskowski, Washington State University; Jodi L. Humann, Washington State University; Dorrie Main, Washington State University; Sook Jung, Washington State University; Chun-Huai Cheng, Washington State University; Taein Lee, Washington State University; Morgan Frank, Washington State University; Kristin Scott, Washington State University; Mirella Flores-Gonzalez, Boyce Thompson Institute; Surya Saha, Boyce Thompson Institute; Lukas Mueller, Boyce Thompson Institute; Albert G. Abbott, Forest Health Research and Education Center, University of Kentucky; Fred G. Gmitter, University of Florida, IFAS-CREC

P0370
Ginseng Genome Database: An Open-Access Platform for Mining Genomic Resources of Panax ginseng
Tae-Jin Yang, Seoul National University; Murukarthick Jayakodi, Seoul National University; Beom-Soon Choi, Phyzen Genomics Institute; Sang-Choon Lee, Seoul National University; Woojong Jang, Seoul National University; Nam-Hoon Kim, Seoul National University

P0371
The Functional Annotation of Animal Genomes (FAANG) Project: Metadata, Data Sharing and the FAANG Data Portal
Peter W Harrison, European Bioinformatics Institute (EMBL-EBI); Susan Fairley, EMBL-EBI; David Richardson, EMBL-EBI; Ian Streeter, EMBL-EBI; Guy Cochrane, European Bioinformatics Institute (EMBL-EBI); Alan L. Archibald, The Roslin Institute and R(D)SVS, University of Edinburgh; Paul Flicek, EMBL-EBI; Laura Clarke, EMBL-EBI

P0372
Introducing the Vertebrate Gene Nomenclature Committee (VGNC)
Bethan Yates, European Bioinformatics Institute (EMBL-EBI); Susan Tweedie, European Bioinformatics Institute (EMBL-EBI); Bryony Braschi, European Bioinformatics Institute (EMBL-EBI); Kristian Gray, European Bioinformatics Institute (EMBL-EBI); Ruth Seal, European Bioinformatics Institute (EMBL-EBI); Elspeth Bruford, European Bioinformatics Institute (EMBL-EBI)

P0373
Facilitating Comparative Functional Genomics through Data Reuse with Livestock EpiDB
Elyn Fritz-Waters, Department of Animal Science, Iowa State University; James M. Reecy, Department of Animal Science, Iowa State University; James E. Koltes, Department of Animal Science, University of Arkansas

P0374
Bgee: Database and R Package for Retrieving the Preferred Anatomical Expression Localization of a List of Genes, or of a Single Gene, in Animals
Frederic B. Bastian, SIB Swiss Institute of Bioinformatics - University of Lausanne

P0375
Bovinemine: Integrating Genomic Data of Ruminant Livestock Species
Darren E. Hagen, Division of Animal Sciences, University of Missouri; Deepak R. Unni, Division of Animal Sciences, University of Missouri; Colin M. Diesh, Division of Animal Sciences, University of Missouri; Aditi Tayal, Division of Animal Sciences, University of Missouri; Christine G. Elsik, Division of Animal Sciences, University of Missouri

P0376
Integration of Data Mining and Meta-analysis of Transcriptomic Data to Identify the Key Genes in Mastitis Resistance in Dairy Cows
Somayeh Sharifi, College of Agriculture, Esfahan University of Technology; Abbas Pakdel, Isfahan University of Technology; Mansour Ebrahimie, University of Qom; Esmaeil Ebrahimi, University of South Australia; Mahdi Saatchi, Department of Animal Science, Iowa State University - American Simmental Association; James M. Reecy, Department of Animal Science, Iowa State University

P0378
HPIDB: A Database for Annotation, Computational Prediction and Analysis of Host-Pathogen Interactions
Fiona McCarthy, University of Arizona; Bindu Nanduri, Mississippi State University; Cathy R. Gresham, Institute for Genomics, Biocomputing & Biotechnology; Mais G. Ammari, School of Animal and Comparative Biomedical Sciences; Prashanti Manda, University of North Carolina at Greensboro

P0379
Pseudostellaria Database: An Integrated Web-Based Platform of Pseudostellaria genus Covering from Genomic and Transcriptomic Resources to Ecological Information
Jongsun Park, InfoBoss Co., Ltd.; Yongsung Kim, InfoBoss Co., Ltd.; Hong Xi, InfoBoss Co., Ltd.; Hakgu Kang, InfoBoss Co., Ltd.

P0380
Curated Content in RefSeq Genome Annotations
Shashikant Pujar, NCBI, National Institutes of Health; Kim Pruitt, National Center for Biotechnology Information, NLM, National Institutes of Health; Terence D. Murphy, National Center for Biotechnology Information (NCBI/NLM/NIH); The RefSeq Group, NCBI

P1209
Plant Reactome: A Resource for Comparative Analysis of Plant Pathways
Pankaj Jaiswal, Department of Botany & Plant Pathology, Oregon State University; Justin Preece, Department of Botany & Plant Pathology, Oregon State University; Parul Gupta, Department of Botany & Plant Pathology, Oregon State University; Sushma Naithani, Department of Botany & Plant Pathology, Oregon State University; Peter D'Eustachio, NYU School of Medicine; Lincoln Stein, Ontario Institute of Cancer Research; Doreen Ware, Cold Spring Harbor Laboratory; Justin L. Elser, Department of Botany & Plant Pathology, Oregon State University

P1221
Curated Content of RefSeq Genomes
Shashikant Pujar, NCBI, National Institutes of Health

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