30
Genome Mapping, Tagging & Characterization: Other Plant Species

P0927
Development and Analysis of Genomic Resources for the Saguaro Cactus (Carnegiea gigantea) and Other Cactaceae
Dario Copetti, Arizona Genomics Institute; Alberto Burquez, Instituto de Ecología, Unidad Hermosillo Universidad Nacional Autónoma de Mexico; Tania Hernandez, Ecology and Evolutionary Biology - The University of Arizona; Tiffany Liu, Department of Plant Biology - Michigan State University; Kevin Childs, Department of Plant Biology - Michigan State University; Luis Eguiarte, Departamento de Ecología Evolutiva, Instituto de Ecología, Universidad Nacional Autónoma de México; Michelle McMahon, School of Plant Sciences, Ecology and Evolutionary Biology, Bio5; Rod Wing, School of Plant Sciences, Ecology & Evolutionary Biology, Arizona Genomics Institute; Martin Wojciechowski, Arizona State University Tempe; Michael Sanderson, University of Arizona

P0928
Generating a Robust Genome and Transcriptome for Prickly Pear Cactus
Jesse A. Mayer, Department of Biochemistry and Molecular Biology, University of Nevada, Reno; Won Cheol Yim, Department of Biochemistry and Molecular Biology, University of Nevada, Reno; Bernard W. M. Wone, Department of Biochemistry and Molecular Biology, University of Nevada, Reno; Andrew H. Paterson, Plant Genome Mapping Laboratory, University of Georgia; John C. Cushman, Department of Biochemistry and Molecular Biology, University of Nevada, Reno

P0929
Unravelling Roots for Drought Stress Defense in Cereal Crops
Ajaz Ahmad Lone, MISSISSIPPI STATE UNIVERSITY; Salah Jumah, mississippi state University; Raja Reddy Kambham, Mississippi State University

P0930
Draft Genome Sequencing of Buckwheat (Fagopyrum esculentum) and Application for Identifying Agronomically Useful Genes
Hideki Hirakawa, Kazusa DNA Research Institute; Yasuo Yasui, Kyoto University; Mariko Ueno, Kyoto University; Katsuhiro Matsui, National Agriculture and Food Research Organization; Tomoyuki Katsube-Tanaka, Kyoto University; Soo J. Yang, Kyoto University; Jotaro Aii, Niigata University of Pharmacy and Applied Life Science; Shingo Sato, Niigata University of Pharmacy and Applied Life Science; Masashi Mori, Ishikawa Prefectural University

P0931
Predicting Phenotypic and Genotypic Response of the Dominant Prairie Grass Andropogon gerardii to Climate Change in the US Central Grasslands
Loretta C Johnson, Kansas State University; Jacob Alsdurf, Kansas State University; Matthew Galliart, Kansas State University; Sara G Baer, Southern Illinois University; Mary Knapp, Departement of Agronomy; Adam Smith, Missouri Botanical Garden

P0932
Mutagenesis and Genomic Analysis in Arundo donax
Fabio Valli, Department of Agricultural Sciences, University of Bologna; Daniele Trebbi, GENETICLAB SRL; Davide Scaglione, IGA Technology Services; Simone Scalabrin, IGA Technology Services; Danara Ormanbekova, Department of Agricultural Sciences, University of Bologna; Federica Cattonaro, IGA Technology Services; Roberto Tuberosa, Department of Agricultural Sciences, University of Bologna; Andrea Monti, Department of Agricultural Sciences, University of Bologna; Michele Morgante, Università di Udine; Silvio Salvi, Department of Agricultural Sciences, University of Bologna

P0933
Efficiency and Inheritance Patterns of CRISPR/CAS9-Induced Gene Modifications in Lettuce (L. sativa)
Lien Bertier, Genome Center, University of California Davis; Heqiang Huo, Department of Plant Sciences, UC Davis; Richard Michelmore, Genome Center, University of California Davis

P0934
Exploitation of Natural Variation in Nitrogen Uptake and Metabolism to Develop Lettuce Cultivars with Improved Nitrogen Use Efficiency
David W. Still, Cal Poly Pomona and the CSU Agricultural Research Institute; Youngsook You, Cal Poly Pomona

P0935
Resistance Genes Against Lettuce Downy Mildew
Lorena Parra, University of California Davis; Maria Jose Truco, Genome Center, University of California Davis; Richard Michelmore, Genome Center, University of California Davis

P0936
Genetic Basis of Resistance against Fusarium and Verticillium Wilts in Multiple Populations of Lettuce
Maria Jose Truco, Genome Center, University of California Davis; Lien Bertier, Genome Center, University of California Davis; German Sandoya Miranda, Genome Center, University of California Davis; Sebastian Reyes-Chin-Wo, Genome Center, University of California Davis; Thomas R Gordon, Department of Plant Pathology, University of California Davis; Richard Michelmore, Genome Center, University of California Davis

P0937
Genetic Diversity and Association Analysis in Spinach
Ainong Shi, University of Arkansas; Beiquan Mou, USDA-ARS; Jim Correll, University of Arkansas; Jun Qin, University of Arkansas; Yuejin Weng, University of Arkansas; Dennis Motes, University of Arkansas; Wei Yang, University of Arkansas

P0938
Genome Editing in Flax in Response to Stress
Christopher Cullis, Case Western Reserve University; Margaret Cullis, Case Western Reserve University

P0939
The Chromosome Scaffold Based Quinoa Genome: Its Building and Its Use to Find the Non-Bitter Mutations in Quinoa
Eibertus N. van Loo, Plant Breeding, Wageningen University & Research; David E Jarvis, King Abdullah University of Science and Technology; Theo J.A. Borm, Plant Breeding, Wageningen University & Research; Yung Shwen Ho, King Abdullah University of Science and Technology; Sandra M Schmoeckel, King Abdullah University of Science and Technology; Eric N. Jellen, Brigham Young University; Najeh M. Kharbatia, King Abdullah University of Science and Technology; Bo Li, King Abdullah University of Science and Technology; Damien James Lightfoot, King Abdullah University of Science and Technology; Noha O. Saber, King Abdullah University of Science and Technology; Elio Schijlen, Plant Research International, Wageningen University & Research; C. Gerard van der Linden, Plant Breeding, Wageningen University & Research; Peter J. Maughan, Brigham Young University; Mark A. Tester, King Abdullah University of Science and Technology

P0940
Genetic Variation for Salt Tolerance in European Sweet and Bitter Quinoa and Their Offspring
Eibertus N. van Loo, Plant Breeding, Wageningen University & Research; L. Arnoldus den Toom, Plant Breeding, Wageningen University & Research; P. Viviana Jaramillo, Plant Breeding, Wageningen University & Research; C. Gerard van der Linden, Plant Breeding, Wageningen University & Research

P0941
PacBio and Hi-C Based Proximity-Guided Assembly of Amaranth Pseudo Chromosomes
Peter J. Maughan, Brigham Young University; Thiruvarangan Ramaraj, National Center for Genome Resources (NCGR); Eric N. Jellen, Brigham Young University; Rebekah Lee, Brigham Young University

P0942
Comparison of Statistical Methods and Reliability of Genomic Prediction in Coffea canephora Populations
Luis Felipe V. Ferrão, University of São Paulo (ESALQ/USP); Romario G. Ferrão, Instituto Capixaba de Pesquisa,Assistência Técnica e Extensão Rural; Maria A. G. Ferrão, INCAPER/EMBRAPA CAFÉ; Aymbire Fonseca, Instituto Capixaba de Pesquisa e Assistência Técnica e Extensão Rural / Embrapa Café; Matthew Stephens, University of Chicago; Antonio Augusto Franco Garcia, University of São Paulo (ESALQ/USP)

P0944
Genetic Load in Cassava
Ramu Punna, Institute for Genomic Diversity, Cornell University; Williams Esuma, National Crops Resources Research Institute, Uganda; Robert Kawuki, National Crops Resources Research Institute; Ismail Rabbi, International Institute of Tropical Agriculture (IITA); Chiedozie Egesi, National Root Crops Research Institute (NRCRI); Jessen V. Bredeson, University of California, Berkeley; Rebecca Bart, Donald Danforth Plant Science Center; Janu Verma, Cornell University; Edward S. Buckler, USDA-ARS-Cornell University; Fei Lu, Institute for Genomic Diversity, Cornell University

P0945
Chromosome-Level Assembly of Farmer Preferred Cassava Varieties Using Single – Molecule Sequencing (SMRT) Technology and Chromosome-Conformation Capture
Joel Kuon, Institute of Plant Sciences, ETH Zürich; Mark Wilson, Donald Danforth Plant Science Center; Weihong Qi, Functional Genomics Center, University Zurich; Rebecca Bart, Donald Danforth Plant Science Center; Ueli Grossniklaus, University of Zurich, Department of Plant and Microbal Biology; Wilhelm Gruissem, Institute of Plant Sciences, ETH Zürich; Hervé Vanderschuren, Gembloux Agro-Bio Tech, University of Liège

P0946
QTL Associated with Field Resistance to Cassava Brown Streak Disease in the Context of the Genetic Relationship Among Genotypes
Morag E. Ferguson, International Institute of Tropical Agriculture (IITA); Esther A. Masumba, International Institute of Tropical Agriculture (IITA); Fortunus A. Kapinga, Naliendele Agricultural Research Institute (NARI); Inosters Nzuki, International Institute of Tropical Agriculture (IITA); Bernadetha Kimatha, Naliendele Agriculture Research Institute; Kasele Salum, Ukiriguru Research Institute; Heneriko Philbert Kulembeka, Ukiriguru Research Institute; Geoffrey Suleiman Mkamilo, Naliendele Agricultural Research Institute (NARI); Jessica B. Lyons, University of California, Berkeley; Jessen V. Bredeson, University of California, Berkeley; Trushar Shah, IITA; Manpreet S. Katari, New York University; Edward Kanju, International Institute of Tropical Agriculture (IITA); Alexander A Myburg, Department of Genetics, University of Pretoria; Albe van der Merwe, University of Pretoria; Daniel S. Rokhsar, DOE Joint Genome Institute; Steve Rounsley, Genus plc

P0947
A High Density Genetic Map of Sweetpotato [Ipomoea batatas (L.) Lam] Based on High Throughput Sequence-Based Diversity Array Technology Markers (DArTseq)
Dorcus C. Gemenet, International Potato Center (CIP); David Maria, International Potato Center (CIP); Mercy N. Kitavi, International Potato Center (CIP); Federico Diaz, International Potato Center (CIP); Reinhard Simon, International Potato Center (CIP); Nasser Yao, BecA-ILRI Hub; Veronica Mosquera, International Potato Center (CIP); Rudy Cruz, International Potato Center (CIP); Sonia Frey, International Potato Center (CIP); Andrzej Kilian, Diversity Arrays Technology Pty Ltd; Craig Yencho, North Carolina State University; Wolfgang Gruneberg, International Potato Center (CIP); Marc Ghislain, International Potato Center (CIP); Merideth Bonierbale, International Potato Center (CIP); Awais Khan, International Potato Center (CIP)

P0948
Fingerprinting of the Global in trust Sweetpotato Collections
N.A. Barkely, International Potato Center; Genoveva Rossel, International Potato Center; Ronald Robles, International Potato Center; Andrzej Killian, DArT; David Ellis, International Potato Center

P0949
Understanding the Effect of Sweetpotato Virus Disease Complexes on Gene Expression, and DNA-Histone Interactions
Elizabeth Fiedler, Delaware State University; Lekha N. Paudel, Delaware State University; Marikis Alvarez, Delaware State University; Vasudevan Ayyappan, Delaware State University; Muthusamy Manoharan, University of Arkansan-PIne Bluff; Sathish Kumar Ponniah, University of Arkansas at Pine Bluff; Venu (Kal) Kalavacharla, Delaware State University

P0950
High-Density Linkage Map Construction for Identifying Gene(s) Associated with Soil Rot Resistance in Sweetpotato
Yuki Monden, Okayama University

P0951
Identifying Sex Determination Loci and Developing Genomic Resources in the Highly Heterozygous White Guinea Yam (Dioscorea rotundata Poir.)
Muluneh Tamiru Oli, Iwate Biotechnology Research Center; Satoshi Natsume, Iwate Biotechnology Research Center; Hiroki Takagi, Iwate Biotechnology Research Center; Benjamen H White, The Earlham Institute; Wilfried Haerty, Earlham Institute; Sophien Kamoun, The Sainsbury Laboratory; Ryohei Terauchi, Iwate Biotechnology Research Center

P0952
Phenotypes, Genome Wide Markers, and Structured Genetic Populations: A Means to Understand Economically Important Traits in Beta vulgaris and to Inform the Process of Germplasm Enhancement
Paul Galewski, Michigan State University

P0953
Genome-Wide Characterization and Functional Discovery Provides New Insights into the Landscape of Long Noncoding RNAs in Panax ginseng
Murukarthick Jayakodi, Seoul National University; Sampath Perumal, Seoul National University; Yun Sun Lee, Seoul National University; Sang-Choon Lee, Seoul National University; Tae-Jin Yang, Seoul National University

P0954
Draft Sequence of Panax ginseng Allows Understanding of Its Genome Structure and Evolution
Nam-Hoon Kim, Seoul National University; Murukarthick Jayakodi, Seoul National University; Sang-Choon Lee, Seoul National University; Woojong Jang, Seoul National University; Junki Lee, Seoul National University; Nomar Espinosa Waminal, Seoul National University; Binh Nguyen, Seoul National University; Beom-Soon Choi, Phyzen Genomics Institute; Yeisoo Yu, Phyzen Genomics Institute; Tae-Jin Yang, Seoul National University

P0955
Ten Bacterial Artificial Chromosome Sequences Reveal the Genome Characteristic and Structure of Panax ginseng
Woojong Jang, Seoul National University; Nam-Hoon Kim, Seoul National University; Junki Lee, Seoul National University; Murukarthick Jayakodi, Seoul National University; Sang-Choon Lee, Seoul National University; Tae-Jin Yang, Seoul National University

P0956
Identification of Transcript-Derived Sequences That Vary in Abundance during Cold Acclimation in Red Clover (Trifolium pratense L.) By SRAP-cDNA
Solen Rocher, Agriculture and Agrifood Canada; Josee Michaud, Agriculture and Agrifood Canada; Yves Castonguay, Agriculture and Agrifood Canada; Annick Bertrand, Agriculture and Agrifood Canada; Annie Claessens, Agriculture and Agrifood Canada

P0957
Differential Expression, Regulatory Divergence, and Sex Dimorphism Pervade the Shrub Willow (Salix spp.) Transcriptome
Craig H. Carlson, Cornell University; Yongwook Choi, J. Craig Venter Institute; Agnes P. Chan, J. Craig Venter Institute; Michelle J. Serapiglia, USDA Sustainable Biofuels and Co-Products; Fred E. Gouker, Cornell University; Stephen P. DiFazio, West Virginia University; Christopher D. Town, J. Craig Venter Institute; Lawrence B. Smart, Cornell University

P0958
Developing Foundational Genomic Resources For High Throughput Phenotyping Of Pistachio
William J. Palmer, Genome Center, University of California Davis; Ewelina Jacygrad, Genome Center, University of California Davis; John E. Preece, Nat'l Clonal Germplasm Repository; Deborah Golino, Plant Pathology, University of California Davis; Richard Michelmore, Genome Center, University of California Davis

P0959
Development  of Stevia rebaudiana Production in Europe: Germplasm Evaluation and Molecular Markers Development for Breeding Purposes
Cecile Hastoy, Oviatis INRA; Patrick Cosson, INRA; Eric Sclaunich, Invenio; Pierre Jannot, Rouages SA; Philippe Boutie, Oviatis SA; Sebastien Cavaignac, Invenio; Dominique Rolin, INRA; Valerie Schurdi-Levraud, INRA - University of Bordeaux

P0960
Developing a Molecular Pipeline to Identify Chenopodium Species in New England
Erin Neff, University of New Hampshire; Richard G. Smith, University of New Hampshire; Thomas M. Davis, University of New Hampshire

P0961
De Novo Assembly of an Ornamental Plant Genome - Penstemon barbatus
Peng Jiang, Duke University; Mark Rausher, Duke University

P0962
A Phylogenomic Toolkit for Resolving One of the Most Recalcitrant Angiosperm Clades: Malpighiales
Rafaela Jorge Trad, University of Campinas; Claudio B. C. Silva, University of Campinas; Zhenxiang Xi, Harvard University; Maria C. E. Amaral, University of Campinas; Charles C. Davis, Harvard University

P0963
The Genome of a Southern Hemisphere Seagrass Species (Zostera muelleri)
Huey Tyng Lee, University of Queensland; Agnieszka Golicz, University of Queensland; Philipp E. Bayer, University of Western Australia; Yuannian Jiao, Plant Genome Mapping Laboratory, University of Georgia; Andrew H. Paterson, Plant Genome Mapping Laboratory, University of Georgia; Haibao Tang, Center for Genomics and Biotechnology, Haixia Institute of Science and Technology; Gaurav Sablok, University of Technology Sydney; Rahul R. Krishnaraj, University of Queensland; Chon-Kit Kenneth Chan, University of Western Australia; Jacqueline Batley, University of Queensland; Gary A. Kendrick, University of Western Australia; Anthony W.D. Larkum, University of Technology Sydney; Peter Ralph, University of Technology Sydney; David Edwards, University of Western Australia

P0964
Novel Class II DNA Transposon in Selaginella moellendorffii
Stefan H. Cerbin, Michigan State University

P1201
An Ultra-High Density, Sequencing-Based Genetic Map Improve the Reference Genome of Asian Lotus
Mei Yang, Key Laboratory of Aquatic Plant and Watershed Ecology, Wuhan Botanical Garden, Chinese Academy of Sciences; Pingfang Yang, Key Laboratory of Aquatic Plant and Watershed Ecology, Wuhan Botanical Garden, Chinese Academy of Sciences; Ray Ming, Center for Genomics and Biotechnology, Fujian Agriculture and Forestry University

P1219
Alternative Splicing in the Gbssi Gene Involved in Amylose-Free Cassava
Diana Katherine Castillo Avila, CIAT; Manuel Ruiz, CIRAD, UMR AGAP / CIAT; L. Augusto Becerra Lopez-Lavalle, International Center for Tropical Agriculture, CIAT

P1247
Genome-Wide Association Studies Accelerates Genomic Selection: Implications for Cbsv Resistance in Cassava
Ismail Siraj Kayondo, National Crop Resources Research Institute (NaCRRI); Dunia Pino del Carpio, Cornell University; Roberto Lozano, Cornell University; Alfred Ozimati, National Crops Resources Research Institute (NACRRI); Marnin Wolfe, Departement of Plant Breeding Cornell University; Yona Baguma, National Crops Resources Research Institute (NaCRRI); Vernon Gracen, Department of Plant breeding and Genetics, Cornell University,; Samuel Offei, University of Ghana; Robert Kawuki, National Crops Resources Research Institute; Jean-Luc Jannink, USDA-ARS

P1259
The Physical and Genetic Structure of the Chinese Chestnut (Castanea mollissima) Genome
Nathaniel Cannon, Penn State University; Margaret Staton, University of Tennessee, Knoxville; Charles Addo-Quaye, Pennsylvania State University; Nurul Islam-Faridi, Southern Institute of Forest Genetics, US Forest Service; Lynn P. Tomsho, Pennsylvania State University; Stephen P. Ficklin, Washington State University; Christopher A. Saski, Clemson University Genomics & Computational Biology Laboratory; Richard Burhans, Pennsylvania State University; Daniela Drautz, Nanyang Technological University; Nicole Zembower, Dept. of Ecosystem Science & Management, Pennsylvania State University; Stephan C. Schuster, Singapore Centre on Environmental Life Sciences Engineering; Albert G. Abbott, Forest Health Research and Education Center, University of Kentucky; C. Dana Nelson, Southern Institute of Forest Genetics, US Forest Service SRS; Frederick Hebard, The American Chestnut Foundation Meadowview Research Farms; John E. Carlson, Dept. of Ecosystem Science & Management, Pennsylvania State University

P1261
Comparison of Statistical Methods and Reliability of Genomic Prediction within and Between Environments and Breeding Populations in Coffea canephora
Luis Felipe V. Ferrão, University of São Paulo (ESALQ/USP); Romario G. Ferrão, Instituto Capixaba de Pesquisa,Assistência Técnica e Extensão Rural; Maria A. G. Ferrão, INCAPER/EMBRAPA CAFÉ; Aymbire Fonseca, Instituto Capixaba de Pesquisa e Assistência Técnica e Extensão Rural / Embrapa Café; Matthew Stephens, University of Chicago; Antonio Augusto Franco Garcia, University of São Paulo - Brazil

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