4166
Aquaculture

This workshop will cover current research advances on development of molecular and genomics tools for aquaculture species, application of molecular genetics and genomics to selective breeding, application of genome editing in aquaculture, and selective breeding in commercial aquaculture populations.
Date: Saturday, January 14, 2017
Time: 8:00 AM-6:10 PM
Room: Royal Palm Salon 3-4
Organizer:
Nathan Campbell
8:00 AM
Welcoming Remarks


8:05 AM
W026
Epigenetics in Salmonids: Impacts of Rearing Environment, Hybridization and Inbreeding
Louis Bernatchez, Université Laval; Martin Laporte, University Laval; Jeremy Le Luyer, University Laval

PDF file
8:45 AM
W027
Genome Biology of Maraena Whitefish (Coregonus maraena, BLOCH, 1779) for Preservation of Baltic Fish Biodiversity
Tom Goldammer, Leibniz Institute for Farm Animal Biology (FBN); Ronald M. Brunner, Leibniz Institute for Farm Animal Biology (FBN); Alexander Rebl, Leibniz Institute for Farm Animal Biology (FBN); Frieder Hadelich, Leibniz Institute for Farm Animal Biology (FBN); Andreas Brietzke, Leibniz Institute for Farm Animal Biology (FBN); Andreas Borchel, SLRC-Sea Lice Research Centre, Department of Biology, University of Bergen; Simone Altmann, Leibniz Institute for Farm Animal Biology (FBN); Mareen Nipkow, Leibniz Institute for Farm Animal Biology (FBN)

9:05 AM
W028
A Genomic Toolbox (genome, transcriptome and GBS) for the New Zealand Greenshell™ Mussel (Perna canaliculus)
Rachael Ashby, AgResearch Ltd, Invermay Agricultural Centre; Hayley Baird, AgResearch Ltd, Invermay Agricultural Centre; Rudiger Brauning, AgResearch, Invermay Agricultural Centre; Rayna Anderson, AgResearch, Invermay Agricultural Centre; Tracey Van Stijn, AgResearch, Invermay Agricultural Centre; Kim Rutherford, University of Otago, Department of Anatomy; Chris Brown, University of Otago, Department of Biochemistry; Neil Gemmell, University of Otago, Department of Anatomy; Shannon Clarke, AgResearch, Invermay Agricultural Centre

9:25 AM
W029
Genome Sequencing of 20 Tasmanian Atlantic Salmon Used to Characterize Multiple Loci Associated with Sex Determination
James Kijas, CSIRO Agriculture

PDF file
9:45 AM
W030
Development of a Genotyping-in-Thousand By Sequencing (GT-seq) Panel for Traceability in Chilean Blue Mussel
Cristian Araneda, Universidad de Chile, Depto. de Produccion Animal; M. Angelica Larrain, Universidad de Chile, Departamento de Ciencia de los Alimentos y Tecnología Química; Nathan Campbell, Columbia River Inter-Tribal Fish Commission; Felipe Jilberto, Universidad de Chile, Depto. de Produccion Animal; Qingchao Wang, Huazhong Agricultural University, College of Fisheries; Shawn Narum, Columbia River Inter-Tribal Fish Commission

PDF file
10:05 AM
AM Break


10:20 AM
Using Pooled DNA of a Reference Population in Genomic Selection for a Disease Trait in Atlantic Salmon
Anna K Sonesson, Nofima AS

10:40 AM
W032
Applying Transcriptomic Profiling to the Formulation of Sustainable Feeds for Atlantic Salmon (Salmo salar)
Albert Caballero-Solares, Department of Ocean Sciences, Memorial University of Newfoundland

PDF file
11:00 AM
W033
Identification of Commercial Rainbow Trout Strains Using a SNP Panel
Sixin Liu, USDA-ARS-NCCCWA; Yniv Palti, USDA-ARS-NCCCWA; Kyle E. Martin, Troutlodge, Inc.; James E. Parsons, Troutlodge, Inc.; Caird E. Rexroad, III, USDA-ARS-NCCCWA

11:20 AM
W034
The Intestinal Immune Responses of Channel Catfish Against Live-Attenuated Edwardsiella Ictaluri Vaccines
Nawar Al-Janabi, Mississippi State University; Hossam Abdelhamed, Mississippi State University; Jingjun Lu, Mississippi State University; Iman Ibrahim, Mississippi State University; Wes Baumgartner, Mississippi State University; Lesya Pinchuk, Mississippi State University; Mark Lawrence, Mississippi State University; Attila Karsi, Mississippi State University

PDF file
11:40 AM
W035
Progress on the Genome Characterisation of the Sydney Rock Oyster (Saccostrea glomerata)
Daniel Powell, University of the Sunshine Coast; Wayne O'Connor, NSW Department of Industry, Department of Primary Industries; David Raftos, Macquarie University; Abigail Elizur, University of the Sunshine Coast

PDF file
12:00 PM
Lunch Break


1:10 PM
W036
Salmonid genomics to advance our understanding of genome evolution, adaptation and the genetic architecture of complex traits
Sigbjørn Lien, Centre of Integrative Genetics (CIGENE), Department of Animal and Aquacultural Sciences, Norwegian University of Life Sciences

PDF file
1:50 PM
W037
Identification of Genomic Loci Associated with Maturation in Pacific Coho Salmon (Oncorhynchus kisutch)
Michelle T.T. Crown, Simon Fraser University, Molecular Biology and Biochemistry Department; Krzysztof P. Lubieniecki, Simon Fraser University, Molecular Biology and Biochemistry Department; Kristen A. Christensen, Simon Fraser University, Molecular Biology and Biochemistry Department; Ruth E. Withler, Fisheries and Oceans Canada, Pacific Biological Station; Janine Supernault, Fisheries and Oceans Canada, Pacific Biological Station; Robert H. Devlin, Fisheries and Oceans Canada, Centre for Aquaculture and Environmental Research; William S. Davidson, Simon Fraser University, Molecular Biology and Biochemistry Department

PDF file
2:10 PM
Development of an Efficient Genome Editing Method in Salmonid Species
Victor Martinez, FAVET-INBIOGEN. University of Chile

PDF file
2:30 PM
W038
Third Generation Sequencing: Unraveling the Genome and the Immunoglobulin Superfamily Genes in Catfish (Ictalurus punctatus)
Sylvie M.A. Quiniou, USDA-ARS

PDF file
2:50 PM
W039
Genotype Imputation to Improve the Efficiency of Genomic Selection in Atlantic Salmon
Ross D. Houston, The Roslin Institute and R(D)SVS, University of Edinburgh

3:10 PM
PM Break


3:25 PM
W040
GWAS of Bacterial Cold Water Disease Resistance in Rainbow Trout Reveals the Potential for a Combined Approach Between Genomic Selection and Marker Assisted Selection
Yniv Palti, USDA-ARS-NCCCWA

PDF file
3:45 PM
W041
The Genetics of Muscle Color in Atlantic Salmon
Jacob Seiloe Torgersen, AquaGen; Marte Sodeland, NMBU – CIGENE; Hanna Helgeland, NMBU – CIGENE; Nina Zoric, NMBU – CIGENE; Dag Inge Våge, NMBU – CIGENE; Sissel Kjøglum, AquaGen; Sven Arild Korsvoll, AquaGen; Nina Santi, Aquagen, Norway. Blue Genomics.; Sigbjørn Lien, CIGENE, Norwegian University of Life Sciences; Thomas Moen, AquaGen

4:05 PM
W042
A High Quality Assembly of the Nile Tilapia (Oreochromis niloticus) Genome Provides Insights into the Structure of Two Sex Determination Regions
Matthew A. Conte, University of Maryland

PDF file
4:25 PM
W043
Comparative Genome Analysis of 52 Fish Species Suggests Differential Associations of Repetitive Elements with Their Living Aquatic Environments
Zihao Yuan, Auburn University; The Fish Molecular Genetics and Biotechnology Laboratory; Shikai Liu, Auburn University; The Fish Molecular Genetics and Biotechnology Laboratory; Tao Zhou, Auburn University; The Fish Molecular Genetics and Biotechnology Laboratory; Lisui Bao, Auburn University; The Fish Molecular Genetics and Biotechnology Laboratory; Zhanjiang Liu, Auburn University; The Fish Molecular Genetics and Biotechnology Laboratory

PDF file
4:45 PM
W044
Gut Microbiota Diversity of Pre-Smolt Hatchery Steelhead (Oncorhynchus mykiss) Across the Cascade Divide
Christina C. Yildirimer, Portland State University; Kim H. Brown, Portland State University

5:05 PM
W045
NSRP-8 Bioinformatics Coordinator
James M. Reecy, Department of Animal Science, Iowa State University

5:25 PM
Business Meeting


5:55 PM
Break


7:00 PM
Aquaculture Reception and Poster Session


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