4181
Cattle/Sheep/Goat 1

Date: Saturday, January 14, 2017
Time: 1:30 PM-6:10 PM
Room: San Diego
Organizer:
Jared E. Decker
1:30 PM
Rambouillet Sheep Genomic Resources
Yue Liu, Baylor College of Medicine; R. Alan Harris, Baylor College of Medicine; Xiang Qin, Baylor College of Medicine; Stephen Richards, Baylor College of Medicine; Jeffrey Rogers, Baylor College of Medicine; Yi Han, Baylor College of Medicine; Vanessa Vee, Baylor College of Medicine; Min Wang, Baylor College of Medicine; Qingchang Meng, Baylor College of Medicine; Michael P. Heaton, USDA, ARS, U.S. Meat Animal Research Center (USMARC); Dr. Timothy P.L. Smith, USDA, ARS, USMARC; Brian Dalrymple, CSIRO Agriculture; Stephen N. White, USDA, ARS, Animal Disease Research Unit; Brenda M. Murdoch, University of Idaho; James W. Kijas, CSIRO Animal, Health and Food Science; Noelle Cockett, Utah State University; Donna M. Muzny, Baylor College of Medicine; Richard A. Gibbs, Baylor College of Medicine; Kim C. Worley, Baylor College of Medicine

2:00 PM
The New Goat Long-Read Assembly Enables Interrogation of Genomic Dark Matter
Derek M. Bickhart, Dairy Forage Research Center, USDA-ARS; Benjamin D. Rosen, ARS, USDA; Sergey Koren, National Human Genome Research Institute, National Institutes of Health; Adam Phillippy, National Human Genome Research Institute, National Institutes of Health; Curtis P. VanTassell, Animal Genomics and Improvement Laboratory, USDA-ARS; Dr. Timothy P.L. Smith, USDA, ARS, USMARC

2:30 PM
Bovidae Genome Data at NCBI – from Genome Annotation to Gene Curation
Kim D. Pruitt, National Center for Biotechnology Information (NCBI/NLM/NIH)

3:00 PM
Break


3:30 PM
Host Genomic Control of the Microbiome
Ran Blekhman, University of Minnesota

4:15 PM
Systematic Profiling of Short Tandem Repeats in the Cattle Genome
Lingyang Xu, Institute of Animal Sciences, Chinese Academy of Agricultural Sciences; Ryan Haasl, Department of Biology, University of Wisconsin – Platteville; Jiajie Sun, College of Animal Science, South China Agricultural University; Yang Zhou, College of Animal Science and Technology, Northwest A&F University; Derek M. Bickhart, Dairy Forage Research Center, USDA-ARS; Junya Li, Institute of Animal Sciences, Chinese Academy of Agricultural Sciences; Jiuzhou Song, University of Maryland; Tad S. Sonstegard, Acceligen Inc. Animal Ag. Subsidary of Recombinetics; Curtis P. VanTassell, Animal Genomics and Improvement Laboratory, USDA-ARS; Harris A. Lewin, UC Davis; George E. Liu, Animal Genomics and Improvement Laboratory, USDA-ARS

4:45 PM
Annotating the New Bovine Reference Genome Assembly
Christine G. Elsik, Division of Animal Sciences, University of Missouri; Deepak R. Unni, Division of Animal Sciences, University of Missouri; Darren E. Hagen, Division of Animal Sciences, University of Missouri; Colin M. Diesh, Division of Animal Sciences, University of Missouri

5:15 PM
NRSP8 Bioinformatics Update
James M. Reecy, Department of Animal Science, Iowa State University

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