Session: In Silico Systems Biology: Cellular and Organismal Models I (2012 Annual Meeting)

Description:

A critical component of systems biology is the development of in silico approaches to understand systems of interest. Novel uses of in silico methods to understand biological systems, as well as the development of new technologies and algorithms for in silico systems analysis are examined.

Sponsor:

Topical A: Systems Biology

Chair:

Clifford L. Wang
Assistant Professor
Stanford University
Chemical Engineering
381 NS Mall
Stanford, CA 94305
Email: cliff.wang@stanford.edu

Co-Chair:

Matthew J. Lazzara
University of Pennsylvania
Chemical and Biomolecular Engineering
311A Towne Building
Philadelphia, PA 19104-6393
Email: mlazzara@seas.upenn.edu

Papers:

352a

Modeling the Molecular Crosstalk Between a Growth Factor and a Differentiation Inducing Receptor
Konstantinos Biliouris, University of Minnesota; Harinder Singh, Department of Discovery Immunology, Genentech Inc.; Yiannis Kaznessis, University of Minnesota

352b

Coordination of Quorum Sensing with Cell Motion
David N. Quan, University of Maryland at College Park; William E. Bentley, University of Maryland, College Park

352c

Tissue-Specific Reconstructions of Mouse Metabolism and Interactions Among the Multi-Tissue Network
Chunjing Wang, University of Illinois, Urbana-Champaign; Yuliang Wang, University of Illinois, Urbana-Champaign; Nathan, D. Price, PhD, Institute for Systems Biology

352d

Development of a Metabolite Stress-Response Model in Solventogenic Clostridia by Coupling Multiple –Omic Data with a Genome-Scale Model
Eleftherios T. Papoutsakis, University of Delaware; Shawn W. Jones, University of Delaware; Keerthi P. Venkataramanan, University of Delaware; Blake C. Meyers, University of Delaware; Sridhara G. Kunjeti, University of Delaware; Kevin P. McCormick, University of Delaware; Kelvin H. Lee, University of Delaware; Shuyu Hou, University of Delaware; Maciek R. Antoniewicz, University of Delaware; Jungik Choi, University of Delaware; Jennifer Au, University of Delaware; Costas D. Maranas, The Pennsylvania State University; Patrick F. Suthers, The Pennsylvania State University; Qinghua Wang, University of Delaware; Hongzhan Huang, University of Delaware; Cathy H. Wu, University of Delaware

352e

Metabolic Engineering in Silico Enabled by Manipulating Metabolic Pathway Flux Ratios
Ryan S. Senger, Virginia Tech

352f

Host Metabolic Interaction During Viral Infection: A Model of Bacteriophage T7 In E. Coli
Elsa Birch, Stanford University; Nicholas Ruggero, Stanford University; Markus Covert, Stanford University

352g

In Silico Model of Suppression and Desynchronization of Peripheral Clock Genes in Human Endotoxemia
Panteleimon D. Mavroudis, Rutgers University; Steve E. Calvano, UMDNJ-Robert Wood Johnson Medical School; Ioannis P. Androulakis, Rutgers, The State University of New Jersey

352h

Coarse-Grained Modeling of Molecular Release from an Actin Network
John Kang, Carnegie Mellon University; Kathy M. Puskar, Point Park University ; Russell S. Schwartz, Carnegie Mellon University; Philip R. LeDuc, Carnegie Mellon University

See more of this Group/Topical: Topical A: Systems Biology

<< Previous Session | Next Session >>