189 Poster Session: Computational Molecular Science and Engineering Forum (CoMSEF)


Description:
CoMSEF Poster session

Sponsor:
Computational Molecular Science and Engineering Forum
Co-Sponsor(s):
Poster Sessions (POSTERSESSIONS)


Chair:
Jim Pfaendtner
Assistant Professor
University of Washington
Chemical Engineering
Seattle, WA
98195
Fax Number: 206-685-0666
Email: jpfaendt@uw.edu

Co-chairs:
Heather Mayes
Assistant Professor
University of Michigan
Ann Arbor
Email: hbmayes@umich.edu

Sapna Sarupria
Assistant Professor
Clemson University
Chemical and Biomolecular Engineering
Clemson, SC
29634
Email: ssarupr@g.clemson.edu


Papers:
Probing Enzyme Catalyzed Hydrolysis of Cellulose in Ionic Liquids Using Enhanced Sampling Techniques
Sarah Alamdari, University of Washington; Jim Pfaendtner, University of Washington
From Metal to Plastic: Computer-Assisted Material Design for Marine Engine Non-Structural Components
Erik Laurini, University of Trieste; Maurizio Fermeglia, University of Trieste; Alberto Marinò, University of Trieste; Serena Bertagna, University of Trieste; Vittorio Bucci, University of Trieste; Sabrina Pricl, University of Trieste
Stay Double, Stay Homologous: Combined Computational/Esperimental Approaches to RAD51/ssDNA Interactions in DNA Damage Repair
Domenico Marson, University of Trieste; Erik Laurini, University of Trieste; Suzana Aulic, University of Trieste; Maurizio Fermeglia, University of Trieste; Sabrina Pricl, University of Trieste
Multi-Scale Simulations of Biomacromolecules for Design of Biomaterials
Prhashanna Ammu, University of Delaware; Joshua Condon, University of Delaware; Phillip Taylor, University of Delaware; Arthi Jayaraman, University of Delaware
Binding Rates of Polyaromatic Hydrocarbons during Soot Formation: Insights from Reactive Molecular Dynamics
Eirini Goudeli, University of Minnesota; Christopher J. Hogan Jr., University of Minnesota
Capturing Non-Ideal Surfactant/Nanoparticle Interfacial Structure with Variable Coverage Molecular Simulations
Junwoong Yoon, Carnegie Mellon University; Zachary Ulissi, Carnegie Mellon University
Molecular Simulations of Liquid-like Assemblies of Intrinsically Disordered Proteins
Gregory L. Dignon, Lehigh University; Wenwei Zheng, Arizona State University; Young C. Kim, Naval Research Laboratory; Jeetain Mittal, Lehigh University
Competitive Adsorption of Toxic Gases in a Humid Environment: Insights from Density Functional Theory
N. Scott Bobbitt, Northwestern University; Randall Q. Snurr, Northwestern University
CO2 Adsorption in Nickel Based Metal Organic Framework Ni-DABCO: A Density Functional Theory and Grand Canonical Monte Carlo Study
Orlando A. Mulero Flores, University of Puerto Rico, Mayagüez Campus; Paul Meza-Morales, University of Puerto Rico; Maria Curet-Arana, University of Puerto Rico - Mayaguez
A Comparison of Crystalline and Icosahedral Order in Ag6Cu4 and CuAu Alloys
Brittany Gonzalez, University of North Dakota; Solene Bechelli, University of North Dakota; Caroline Desgranges, University of North Dakota; Jerome Delhommelle, University of North Dakota
Molecular Dynamics Simulation of Modified Nafion 117 Based Anion Exchange Membrane Fuel Cell: Transport and Nanophase-Segregated Structure Properties
Seung Soon Jang, Georgia Institute of Technology; Charles Caliendo Jr., Georgia Institute of Technology
Modeling Rosette Nanotubes Using the Martini Forcefield
Vyshnavi Karra, Northeastern University; Hicham Fenniri, Northeastern University; Francisco R. Hung, Northeastern University
Conformal Sites Model for Adsorbed Films on Energetically Heterogeneous Surfaces
Kaihang Shi, North Carolina State University; Erik E. Santiso, North Carolina State University; Keith E Gubbins, North Carolina State University
Screening of Bio-Based Plasticizers for Poly(vinyl chloride) and Poly(lactic acid) Via Atomistic Simulations
Marcel Balçik, Istanbul Technical University; Hüsamettin D. Özeren, Istanbul Technical University; M. Goktug Ahunbay, Istanbul Technical University; J Richard Elliott, The University of Akron
A Combined Molecular Dynamics and Experimental Study of an Imidazolium Based Ionic Liquid Electrolyte Solution for Low Temperature Applications
Marisa E. Gliege, Arizona State University; Yifei Xu, Arizona State University; Wendy J. Lin, Arizona State University; Zuofeng Zhao, Arizona State University; Stella D. Nickerson, Brigham Young University; Hongyu Yu, Hong Kong University of Science and Technology; Lenore L. Dai, Arizona State University
Biasing High-Dimensional Free-Energy Landscapes for the Detection of Stable Clusters in Self-Assembling Systems
Arushi Prakash, University of Washington; Christopher Fu, University of Washington; Jim Pfaendtner, University of Washington
GPU Accelerated Experiment Directed Metadynamics for Scattering Profile Biasing
Andrew White, University of Rochester; Rainier Barrett, University of Rochester
Aggregation Behavior of 1-n-Dodecyl-3-Methylimidazolium Octylsulfate Biamphiphilic Ionic Liquid in Aqueous Solution
Utkarsh Kapoor, Oklahoma State University; Jindal K. Shah, Oklahoma State University
Composition Effect on the Nucleation Process in CuNi Systems
Solène Bechelli, University of North Dakota; Brittany Gonzalez, University of North Dakota; Caroline Desgranges, University of North Dakota; Jerome Delhommelle, University of North Dakota
Temperature Influence on Potassium Chloride Solution and Sodium Chloride Solution Structure
Junsheng Yuan, Hebei University of Technology; Fei Li, Hebei University of Technology
Predicting Point Defect Concentrations in Complex, Disordered Oxides
Samantha L. Millican, University of Colorado Boulder; Ann M. Deml, National Renewable Energy Laboratory; Alan W. Weimer, University of Colorado Boulder; Aaron M. Holder, University of Colorado at Boulder; Vladan Stevanovic, National Renewable Energy Laboratory; Charles B. Musgrave, University of Colorado Boulder
Reweighting Molecular Simulation Configurations for Rapid Force Field Parameterization
Richard A. Messerly, National Institute of Standards and Technology; Michael R. Shirts, University of Colorado Boulder; S. Mostafa Razavi, The University of Akron
Importance of Molecular Conformations on Dipole Moment and Thermophysical Properties Estimation
Minh Nguyen Vo, University of Pittsburgh; Michael Call, The Lubrizol Corporation; Cliff Kowall, The Lubrizol Corporation; J. Karl Johnson, University of Pittsburgh
Computer-Aided Description of Materials Stability at the Nanoscale
Michael G. Taylor, University of Pittsburgh; Giannis Mpourmpakis, University of Pittsburgh
Dissipative Particle Dynamics Simulations of Reactant Transport through Multicompartment Micelle Nanoreactor
SeungMin Lee, Georgia Institute of Technology; Connor Callaway, Georgia Institute of Technology; Nicholas Bond, Georgia Institute of Technology; Kayla Hendrickson, Georgia Institute of Technology; Aditya Kuntamukkula, Georgia Institute of Technology; Seung Soon Jang, Georgia Institute of Technology
Study of the Effect of a LiOH Layer over the Reactivity of Lithium Metal Anode
Maria Stefany Angarita-Gomez, Texas A&M University; Perla B. Balbuena, Texas A&M University
Predicted Characteristics for the Initial Chemical Events in Off-Gassing from Siloxane Polymer Systems Under Mechanical Loads
Matthew P. Kroonblawd, Lawrence Livermore National Laboratory; Nir Goldman, Lawrence Livermore National Laboratory
The Influence of Pore Structure on Transport in Lyotropic Liquid Crystal Membranes
Benjamin J. Coscia, University of Colorado Boulder; Michael Shirts, University of Colorado Boulder
Combinatorial Computational Studies Towards Advancing Lithium Ion Battery Technologies
Yudhajit Pal, University at Buffalo, SUNY; Gang Wu, University at Buffalo, SUNY; Johannes Hachmann, University at Buffalo, SUNY
High-Throughput in silico Screening of Candidate Compounds for Deep Eutectic Solvents
Yudhajit Pal, University at Buffalo, SUNY; Johannes Hachmann, University at Buffalo
Modeling Side Chain Conformations of Bottlebrush Polymers from iSAFT Density Functional Theory
Yuchong Zhang, Rice University; Shun Xi, Rice University; Walter G. Chapman, Rice University
Web Applications for Rapid Characterization of Nanoporous Materials
Benjamin Bucior, Northwestern University; Randall Q. Snurr, Northwestern University
Agglomerate Formation with Polydisperse Primary Particles in the Transition Regime
Georgios A. Kelesidis, Particle Technology Laboratory, Institute of Process Engineering, Department of Mechanical and Process Engineering, ETH Zurich; Eirini Goudeli, University of Minnesota; Sotiris E. Pratsinis, ETH Zurich
Coarse-Grained Model for Simulating the Boiling Point of Asphaltenes
Steve Groven, University of North Dakota; Caroline Desgranges, University of North Dakota; Jerome Delhommelle, University of North Dakota
DFT Study on the Catalytic Activity of ALD-Grown Iron Oxide Nanoclusters for the Partial Oxidation of Methane to Methanol
Melissa Barona, Northwestern University; Omar K. Farha, Northwestern University; Joseph T. Hupp, Northwestern University; Randall Q. Snurr, Northwestern University
Conformational Mapping of Viral RNA Elements Using Atomistic Simulations
Lev Levintov, University of New Hampshire; Harish Vashisth, UNIVERSITY OF NEW HAMPSHIRE
Gating Mechanisms during Actin Filament Elongation By Formins
Fikret Aydin, The University of Chicago; Naomi Courtemanche, University of Minnesota; Thomas D. Pollard, Yale University; Gregory A. Voth, The University of Chicago
Comparison of Interatomic Potentials for Interfacial Studies of Ionic Liquid Systems
Felix Tiet, Vanderbilt University; Matt Thompson, Vanderbilt University; Peter T. Cummings, Vanderbilt University
Mechanism Development for Catalyzed Ketene Production
Charles J. McGill, North Carolina State University; Sara Jo Taylor, North Carolina State University; Phillip R. Westmoreland, North Carolina State University
Foyer: A Framework for Defining Force Field Usage Semantics and Atom-Typing Molecular Systems
Christopher R. Iacovella, Vanderbilt University; Christoph Klein, Vanderbilt University; Justin Gilmer, Vanderbilt University; Andrew Z. Summers, Vanderbilt University; Jana E. Black, Vanderbilt University; János Sallai, Vanderbilt University; Peter Volgyesi, Vanderbilt University; Clare McCabe, Vanderbilt University; Peter T. Cummings, Vanderbilt University
MoSDeF: A Python-Based Molecular Simulation and Design Framework
Justin Gilmer, Vanderbilt University; Christoph Klein, Vanderbilt University; János Sallai, Vanderbilt University; Andrew Z. Summers, Vanderbilt University; Chris Iacovella, Vanderbilt University; Ákos Lédeczi, Vanderbilt University; Peter Volgyesi, Vanderbilt University; Peter T. Cummings, Vanderbilt University; Clare McCabe, Vanderbilt University
Challenging Statistical Mechanics Approximations in Organic Crystal Thermodynamics
Nathan Abraham, The University of Colorado Boulder; Michael Shirts, University of Colorado Boulder; Eric Dybeck*, Pfizer
Molecular Modeling of Microstructure and Solubilization of Single and Multiple Micelles
Shun Xi, Rice University; Walter G. Chapman, Rice University
Proteins in Extreme Environments: From Understanding Life to Potential Applications
Betul Uralcan, Princeton University; Pablo G. Debenedetti, Princeton University
Applications of Chemml Program Suite in Predicting Properties of Organic Materials: A Path to Data-Driven Discovery in Chemistry
Mojtaba Haghighatlari, University at Buffalo, The State University of New York; Johannes Hachmann, University at Buffalo, SUNY
Advancing Machine Learning and Molecular Descriptor Methodologies Using the Chemml Program Suite
Mojtaba Haghighatlari, University at Buffalo, The State University of New York; Johannes Hachmann, University at Buffalo, SUNY
Molecular Dynamics Simulation of Mixed Aqueous Solutions of NH4Cl and (NH4)2SO4
Junsheng Yuan, Hebei University of Technology; Jihong Wang, Hebei University of Technology
Molecular Dynamics Simulation of Hydration and Swelling of Mixed Layer Clays
Mahsa Rahromostaqim, university of southern california; Muhammad Sahimi, University of Southern California
Reactive Sorption of Sulfur Contaminants By Copper Oxide: A First-Principles Study
Tirso Lopez-Ausens, University of California Los Angeles; Phillippe Sautet, University of California Los Angeles; Dante Simonetti, University of California, Los Angeles
Colloidal Crystal Structure Analysis Using Symmetry Groups and Stochastic Optimization
Evan Pretti, Lehigh University; Nathan A. Mahynski, National Institute of Standards and Technology; Vincent K. Shen, National Institute of Standards and Technology; Jeetain Mittal, Lehigh University
Feasst: Free Energy and Advanced Sampling Simulation Toolkit
Harold W. Hatch, National Institute of Standards and Technology; Nathan A. Mahynski, National Institute of Standards and Technology; Vincent K. Shen, National Institute of Standards and Technology
Modeling the Transformation of Ethene over MFI Using a Hybrid QM/MM Strategy
Erum Mansoor, University of California-Berkeley; Martin Head-Gordon, University of California at Berkeley; Alexis T. Bell, University of California - Berkeley
Combining Open Source and Commercial Software in the Adf Modeling Suite
Fedor Goumans, Software for Chemistry & Materials
Prediction of Phase Behavior of Mixed Solvent Electrolyte Systems Using SAFT-VRE Morse EoS
Reza Shahryari, Iran University of Science and Technology; Mohammad Reza Dehghani, Iran University of Science and Technology
Measurement of the Liquid Thermal Conductivity of HFO-1336mzz(Z)(cis-1,1,1,4,4,4-hexafluoro-2-butene) By Transient Hot-Wire Method
Shuo Qiu, Xi'an Jiaotong University; Xueqiang Wang, Xi'an Jiaotong University; Jiangtao Wu, Xi'an Jiaotong University
Thermodynamic Properties and Molecular Interactions of Azeotropic Mixtures Using Molecular Simulation and Modeling
Dongyang Li, Tianjin University; Hong Li, Tianjin University; Xingang Li, Tianjin University; Xin Gao, Tianjin University; Li Xi, McMaster University
Refining the Nonrandom Two-Liquid Segment Activity Coefficient Model By Applying the Association Theory
Yifan Hao, Texas Tech University; M. R. Islam, Texas Tech University; Chau-Chyun Chen, Texas Tech University
Thermodynamic Description of Shear-Induced Phase Transition in Jammed Soft Particle Glasses
Fardin Khabaz, The University of Texas at Austin; Michel Cloitre, ESPCI Paris, PSL Research University; Roger T. Bonnecaze, The University of Texas at Austin
Assuring High Quality of Thermodynamic/Thermophysical Measurements and Publications: Combustion Calorimetry and Enthalpies of Formation
Ala Bazyleva, National Institute of Standards and Technology; Maria D.M.C. Ribeiro da Silva, University of Porto; Eugene Paulechka, National Institute of Standards and Technology; Demian Riccardi, National Institute of Standards and Technology
Isotropic-Nematic-Smectic Transition of Highly Confined Semi-Flexible Polymer Solutions
Yeng-Long Chen, Academia Sinica; Supriya Roy, Academia Sinica; Dmytro Luzhbin, Academia Sinica
Prevention of High-Temperature Hydrogen Attack in Liquid Lines By Accurate Estimation of Hydrogen Partial Pressure
Paul M. Mathias, Fluor Corporation; Garry Jacobs, Fluor Corporation; Cathleen Shargay, Fluor Corporation
CFD Simulations for Gas Solubility Measurements with Gas-Liquid Segmented Flows
Pradeep Vyawahare, Texas Tech University; Mark W. Vaughn, Texas Tech University; Chau-Chyun Chen, Texas Tech University
Thermodynamic Modeling of Saturn Particles and Phase Behavior in Patchy Colloid Mixtures
Yiwei Zhu, Rice University; Artee Bansal, Rice University; Walter G. Chapman, Rice University
An Ordinary Differential Equation Based Machine Learning Framework
Luke E. K. Achenie, Virginia Polytechnic Institute and State University
PID Control Strategy for Thermostating and Barostating Molecular Dynamics Simulation
Shih-Han Wang, Virginia Tech; Luke Achenie, Virginia Tech
Multiscale Modeling of Actin Filaments
Harshwardhan H. Katkar, The University of Chicago; Fikret Aydin, The University of Chicago; Tamara C. Bidone, The University of Chicago; Alyssa J. Harker, The University of Chicago; David R. Kovar, The University of Chicago; Gregory A. Voth, The University of Chicago
Fluid Behavior and Interfacial Structure of Heterogeneous GO Interlayer Pores
Xiaoning Yang, Nanjing Tech University; Tongfei Yu, Nanjing Tech University; Shuyan Liu, Nanjing Tech University
Molecular Simulation and Experimental Study of Oxalic Acid Adsorption on Water-Feldspar Interface
Xiaopeng Xue, East China University of Science and Technology; Ping Li, East China University of Science and Technology
Molecular Dynamics Analysis of Membrane Proteins As Biosurfactants into Triglycerides – Water Mixtures
Juliana Erika Cristina Cardona Jaramillo, Universidad de los Andes; Oscar A. Alvarez, Universidad de Los Andes; Luke E. K. Achenie, Virginia Polytechnic Institute and State University; Andrés F. González, Universidad de los Andes
Prediction of Calcium Carbonate Wettability By Low Salinity Water Flooding Using Molecular Dynamics Simulations
Mohamed S. AlHosani, Rice University; Fernando Yrazu, Rice University; Arjun V. Parambathu, Rice University; Walter G. Chapman, Rice University
Thermodynamic Stability of Thiolate-Protected Gold Nanoclusters: From Molecular to Metallic Systems
Michael Cowan, University of Pittsburgh; Michael G. Taylor, University of Pittsburgh; Giannis Mpourmpakis, University of Pittsburgh
Reactive Molecular Dynamics Simulation of Disintegration of Cross-Linked Epoxy-Resin Polymers upon Atomic Oxygen Bombardment
Chowdhury Ashraf, The Pennsylvania State University; Aniruddh Vashisth, Texas A&M University; Adri C. T. van Duin, The Pennsylvania State University
Molecular Simulation of CO2 Absorption into MCM-41 Porous Material Filled with PDMS Solvent
Wei Shi, National Energy Technology Laboratory, U.S. Department of Energy; Jeffery Culp, DOE National Energy Technology Laboratory; David Hopkinson, National Energy Technology Laboratory
MD Simulation of a Magnesium Oxide Grain Boundary
Adriaan Riet, Case Western Reserve University; James Van Orman, Case Western Reserve University; Daniel J. Lacks, Case Western Reserve University
Atomistic Simulation of Sliding Friction between Two Silicon-Carbide Surfaces
Nariman Piroozan, University of Southern California; Saber Naserifar, California Institute of Technology; Muhammad Sahimi, University of Southern California
QSAR Modeling for Predicting Elimination Half-Life of Industrial Chemical Compounds
Krystalia Papadaki, Aristotle University of Thessaloniki; Spyros Karakitsios, Aristotle University of Thessaloniki; Dimosthenis Sarigiannis, Aristotle University of Thessaloniki
Electrophilic Aromatic Substitution and Intrinsic Nature of Aromaticity
Mohamed S. AlHosani, Rice University; Walter G. Chapman, Rice University
Prediction of Hg0 and HgCl2 Adsorption Properties in UiO-66 Using Optimized Force-Fields
Hongjian Tang, Georgia Institute of Technology; Hanjun Fang, Georgia Institute of Technology; David S. Sholl, Georgia Institute of Technology; Yufeng Duan, Southeast University
Using Artificial Neural Networks to Model Diffusion Characteristics in Lithium Solid State Electrolytes
Karun K. Rao, University of Houston; Yan Yao, University of Houston; Lars C. Grabow, University of Houston
Using Free Energy Perturbation (FEP) to Rank Binding Affinities for ssDNA-Wrapped Single-Walled Carbon Nanotube (SWCNTs)
Kevin R. Hinkle, National Institute of Standards and Technology; Frederick R. Phelan Jr., National Institute of Standards and Technology
Screening of Nano Porous Materials for Large-Scale Molecular Separations
Dai Tang, Georgia Institute of Technology; Grit Kupgan, University of Florida; Coray M. Colina, University of Florida; David S. Sholl, Georgia Institute of Technology
Abstract Submissions Closed