Allium Vegetables

Allium vegetables such as onion and garlic are essential ingredients of most world cuisines but especially so in Asia. They not only have great economic value but important functional foods. To date progress in genetic and genomic analysis has been limited by the unusually large, heterozygous genomes and complex chemistry. This workshop will highlight the rapid advances being enabled by second-generation sequencing, metabolomics and novel genetic stocks.
Date: Sunday, March 17, 2013
Time: 1:00 PM-3:00 PM
Room: Paradiso
Organizer:
John A. McCallum
Chair:
John A. McCallum
1:00 PM
Introductory Remarks: Challenges and Opportunities in Allium Genetics
John A. McCallum, New Zealand Institute for Plant and Food Research

1:10 PM
Development of EST Markers in Jananese Bunching Onion (Allium fistulosum)
Hikaru Tsukazaki, Institute of Vegetable and Tea Science, NARO; Shigenori Yaguchi, Institute of Vegetable and Tea Science, NARO; Shusei Sato, Kazusa DNA Research Institute; Yuichi Katayose, National Institute of Agrobiological Sciences; Hiroyuki Kanamori, National Institute of Agrobiological Sciences; Kanako Kurita, National Institute of Agrobiological Sciences; Takeshi Itoh, National Institute of Agrobiological Sciences; Jun-ichi Yonemaru, National Institute of Agrobiological Sciences; Masao Hamada, National Institute of Agrobiological Sciences; Hiroyuki Fukuoka, Institute of Vegetable and Tea Science, NARO; Ken-ichiro Yamashita, Institute of Vegetable and Tea Science, NARO; John A. McCallum, New Zealand Institute for Plant and Food Research; Masayoshi Shigyo, Yamaguchi University; Tadayuki Wako, Institute of Vegetable and Tea Science, NARO

1:50 PM
Edible Alliaceae Metabolomics: LC-MS-Based Untargeted Detection and Annotation
Yuji Sawada, RIKEN Plant Science Center; Ryo Nakabayashi, RIKEN Plant Science Center

2:10 PM
Genetic Mapping of Bolting QTL in Bulb Onion (Allium cepa)
Samantha J Baldwin, The New Zealand Institute for Plant & Food Research Limited; Meeghan Pither-Joyce, New Zealand Institute for Plant and Food Research; Kathryn Wright, The New Zealand Institute for Plant & Food Research Limited; Roopashree Revanna, New Zealand Institute for Plant and Food Research; Scout Liu, The New Zealand Institute for Plant & Food Research Limited; Robyn Lee, University of Otago; Richard MacKnight, Biochemistry Department, University of Otago; John A. McCallum, New Zealand Institute for Plant and Food Research

2:30 PM
Transcriptome Sequencing to Produce SNP-Based Genetic Maps of Onion
Janejira Duangjit, University of Wisconsin-Madison; Borut Bohannec, Biotechnical Faculty, University of Ljubljana; Christopher Town, J. Craig Venter Institute; Agnes Chan, J. Craig Venter Institute; Michael J. Havey, USDA-ARS and University of Wisconsin

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