Genome Sequencing & ESTs

Date: Monday, May 19, 2014
Time: 10:00 AM-3:45 PM
Room: Level 2 Foyer
P031
Isoform Sequencing: Unveiling the Complex Landscape in Eukaryotic Transcriptome on the PacBio® RS II
Caroline Chan, Pacific Biosciences; Elizabeth Tseng, Pacific Biosciences; Susana Wang, Pacific Biosciences; Jenny Gu, Pacific Biosciences; Primo Baybayan, Pacific Biosciences

P032
SMRT® Sequencing Solutions for Large Genomes
Sian Loong Au, Pacific Biosciences; Jason Chin, Pacific Biosciences; Paul Peluso, Pacific Biosciences; Kristi Spittle Kim, Pacific Biosciences; Jane Landolin, Pacific Biosciences; Jenny Gu, Pacific Biosciences; David Rank, Pacific Biosciences

P033
Developments in PacBio® Metagenome Sequencing : Shotgun Whole Genomes and Full-Length 16S
Chee How Lee, Pacific Biosciences; Brett Bowman, Pacific Biosciences; Richard Hall, Pacific Biosciences; Meredith Ashby, Pacific Biosciences; Jenny Gu, Pacific Biosciences; Robert Tapella, Pacific Biosciences

P034
High Efficiency Long Insert Mate Pair Library Preparation for NGS Platforms
David Mead, Lucigen Corporation

P035
Comparisons Between RNA-Seq and Microarrays are Dependent upon the Depth at which you Sequence, Transcriptome Size, and Resolution of Expression Events you are Targeting
Anthony Schweitzer, Affymetrix; Weihong Xu, Stanford Genome Technology Center; Wenzhong Xiao, Massachusetts General Hospital; Jason Hubbard, Affymetrix; Stan Trask, Affymetrix, Inc

P036
High-Accuracy de novo Assembly and SNP Detection of Chloroplast Genomes using a SMRT Circular Consensus Sequencing Strategy
Qiushi Li, Institute of Medicinal Plant Development-PUMC; Ying Li, IMPLAD; Shilin Chen, Institute of Medicinal Plant Development, CAMS & PUMC; Jingyuan Song, Institute of Medicinal Plant Development, CAMS & PUMC

P037
Whole Genome Profiling (WGPTM) 2.0: Sequence-Based Physical BAC Maps with Megabasepair Contigs
Jan van Oeveren, KeyGene; Dennis Woltinge, KeyGene; Kim Jansen, KeyGene; Jifeng Tang, KeyGene; Antoine Janssen, KeyGene; Edwin A.G. van der Vossen, KeyGene; Shital Dixit, KeyGene; Michiel J.T. van Eijk, KeyGene

P038
The Chinese Chestnut (Castanea mollissima) Genome
John E. Carlson, Pennsylvania State University; M. Staton, University of Tennessee; Nurul Islam-Faridi, Southern Institute of Forest Genetics, US Forest Service; Charles Addo-Quaye, Purdue University; Nathaniel Cannon, Pennsylvania State University; Lynn P. Tomsho, Pennsylvania State University; Stephen P. Ficklin, Washington State University; Christopher A. Saski, Clemson University Genomics & Computational Biology Laboratory; Richard Burhans, Pennsylvania State University; Daniela Drautz, Nanyang Technological University; Tyler Kane Wagner, Pennsylvania State University; Nicole Zembower, Pennsylvania State University; Stephan Schuster, Pennsylvania State University; Albert G. Abbott, Clemson University; C. Dana Nelson, Southern Institute of Forest Genetics, US Forest Service; F. Hebard, The American Chestnut Foundation

P039
Sequencing of the Pineapple Genome with Short and Long Reads Sequencing Technology
Raimi Mohamed Redwan, Biotechnology Research Institute; Christopher Voo Lok-Yung, Biotechnology Research Institute; Vijay Kumar, Biotechnology Research Institute

P040
De novo Assembly and Analysis of a Korean Native Pig, Chookjin Chamdon
Kyung-Tai Lee, National Institute of Animal Science, RDA; Jung-Woo Choi, University of Guelph; Won-Hyong Chung, Korean Bioinformation Center, KRIBB; Namshin Kim, Korean Bioinformation Center, KRIBB; Myeong-Jik Kim, Animal Genetic Resources Station, NIAS, RDA; Tae-Hun Kim, National Institute of Animal Science, RDA

P041
Recent Progress of Avain Genome Sequencing and Application of High-Throughput Sequencing Technology
Qingle Cai, BGI-tech,Shenzhen, China

P042
De novo Sequencing and Analysis of a Korean Native Black Chicken Genome, Heuksaek Jaerae-jong
Won-Hyong Chung, Korean Bioinformation Center, KRIBB; Kyung-Tai Lee, National Institute of Animal Science, RDA; Jung-Woo Choi, National Institute of Animal Science, RDA; Namshin Kim, Korean Bioinformation Center, KRIBB; Tae-Hun Kim, National Institute of Animal Science, RDA

P043
Sequencing and de novo Assembly of the Mozambique Tilapia Transcriptome
Woei Chang Liew, Temasek Life Sciences Laboratory; Natascha May Thevasagayam, Temasek Life Sciences Laboratory; Sai Rama Sridatta Prakki, Reproductive Genomics Group; Jolly M. Saju, Temasek Life Sciences Laboratory; Xueyan Shen, Temasek Life Sciences Laboratory; Si Yan Ngoh, Temasek Life Sciences Laboratory; Junhui Jiang, Temasek Life Sciences Laboratory; Laszlo Orban, Temasek Life Sciences Laboratory

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