Translational Genomics for Agriculture

Significant advances in recent years have enhanced our understanding of structural and functional aspects of plant genomes. Complete genome sequence has become available for some plant species, while draft genome sequences are being assembled for others. Advances in next-generation sequencing and high-throughput genotyping technologies have made it possible to not only genotype at high-density, but to even re-sequence the mapping populations or germplasm collections. Routine linkage mapping approaches are being transformed to genome-wide association studies (GWAS) for the identification of important marker-trait associations. Marker-assisted selection (MAS) has become an integral part of crop breeding programmes in developed countries/private sector, and in developing countries the use of MAS in breeding programmes has been applied to develop superior varieties/hybrids with better agronomic performance and enhanced resistance/tolerance to biotic/abiotic stresses. New breeding approaches such as marker-assisted recurrent selection (MARS) and genomic selection (GS) are also being used for improving complex traits such as drought tolerance. This workshop is planned to invite genome specialists with extensive experience in genomics-assisted breeding from both public and private sectors to share their experience and propose novel ideas to translate existing genomics knowledge toward the development of new varieties/hybrids. This workshop is expected to catalyze public sector breeding programmes from Asia and Africa to undertake/accelerate translational genomics that will ensure food security in developing countries.
Date: Monday, July 13, 2015
Time: 1:00 PM-3:00 PM
Room: Waterfront 1
Organizer:
Rajeev K Varshney
1:00 PM
3K Rice Genomes for Detailed, Multi-Level Phenotyping
Kenneth L. McNally, International Rice Research Institute; Rod A Wing, International Rice Research Institute; Michael Dingkuhn, International Rice Research Institute; Paul Quick, International Rice Research Institute; Steve Klassen, International Rice Research Institute; Amelia Henry, International Rice Research Institute; Fiona Hay, International Rice Research Institute; Dmytro Chebotarov, International Rice Research Institute; Millicent Sanciangco, International Rice Research Institute; Ruaraidh Hamilton, International Rice Research Institute; Ramil P. Mauleon, International Rice Research Institute; Nickolai Alexandrov, International Rice Research Institute; Hei Leung, International Rice Research Institute

1:20 PM
Genomic Approaches to Understanding Disease Resistance and Applications to Wheat Improvement
Christie Williams, USDA-ARS at Purdue University; Subhashree Subramanyam, Purdue University; Jill A. Nemacheck, USDA-ARS Crop Production and Pest Control Research Unit; Xiangye Xiao, Purdue University

2:00 PM
Mapping QTLs for Root Architecture and Yield in Maize
Silvio Salvi, DipSA - University of Bologna; Silvia Giuliani, DipSA - University of Bologna; Carlos Busanello, Dept of Plant Science, University Federal of Pelotas; Roberto Tuberosa, DipSA - University of Bologna

2:20 PM
Genomics Applied to Iron Stress Tolerance in Rice
Antonio Costa De Oliveira, Federal University of Pelotas

2:40 PM
Problems and Prospects of Alien Chromosome Integration in Wheat Cultivars
Elena A. Salina, Institute of Cytology and Genetics SB RAS; I.N. Leonova, Institute of Cytology and Genetics SB RAS; I.G. Adonina, Institute of Cytology and Genetics SB RAS; A.I. Stasyuk, Institute of Cytology and Genetics SB RAS; Vyachelav V. Piskarev, Siberian Research Institute of Plant Growing and Breeding; Ivan E. Likhenko, Siberian Research Institute of Plant Growing and Breeding

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