W394
VitisGen: Accelerating Grape Cultivar Improvement

Date: Sunday, January 13, 2013
Time: 2:10 PM
Room: Pacific Salon 6-7 (2nd Floor)
Katie Hyma , Cornell University, Ithaca, NY
Qi Sun , Cornell University, Ithaca, NY
Sharon E. Mitchell , Cornell University, Ithaca, NY
Charlotte Acharya , Institute for Genomic Diversity, Cornell University, Ithaca, NY
Jason Londo , USDA-ARS Grape Genetics Research Unit, Geneva, NY
Peter Cousins , USDA-ARS, Geneva, NY
Anne Fennell , South Dakota State University, Brookings, SD
Chin-Feng Hwang , Missouri State University, Mountain Grove, MO
Jiang Lu , Florida A&M University, Tallahassee, FL
Jim Luby , University of Minnesota, St. Paul, MN
David W Ramming , USDA-ARS-CDPG, Parlier, CA
Bruce Reisch , Cornell University, Geneva, NY
Lance E. Cadle-Davidson , USDA-ARS Grape Genetics Research Unit, Geneva, NY
VitisGen is a multiple institute collaborative project funded by the USDA-NIFA SCRI program, with a long term goal to accelerate grape cultivar improvement by using cutting-edge molecular marker technologies, centralized facilities to rigorously characterize traits, and molecular breeding expertise. The genotyping team of the VitisGen project adopted genotyping-by-sequencing (GBS), which is a high-throughput and low-cost genotyping platform originally developed for highly inbred maize and sorghum populations. We will present an overview of the technology, current progress in adapting GBS for marker discovery and map construction in outcrossing grape populations, and strategies to transition from marker discovery to marker application using GBS. We will also discuss the development of quality assurance and quality control procedures for large scale cross disciplinary research collaborations.