Computer Demos 4 - Cross-species

Date: Wednesday, January 16, 2013
Time: 10:20 AM-12:30 PM
Room: California
Organizer:
David E. Matthews
10:20 AM
C23
PRGdb 2.0: Towards a Community-Based Database Model for the Analysis of R-Genes in Plants
Walter Sanseverino, CRAG (CSIC-IRTA-UAB, UB); Antonio Hermoso Pulido, Centre for Genomic Regulation (CRG); Raffaella D'alessandro, DISSPA, University of Naples “Federico II”; Maria Raffaella Ercolano, DISSPA, University of Naples “Federico II”; Anna Vlasova, Centre for Genomic Regulation (CRG); Giuseppe Andolfo, DISSPA, University of Naples “Federico II”; Luigi Frusciante, DISSPA, University of Naples “Federico II”; Ernesto Lowy, Centre for Genomic Regulation (CRG); Guglielmo Roma, Centre for Genomic Regulation (CRG)

PDF file
10:35 AM
C24
PlantTFcat: An Online Plant Transcription Factor and Transcriptional Regulator Categorization and Analysis Tool
Xinbin Dai, The Samuel Roberts Noble Foundation; Senjuti Sinharoy, The Samuel Roberts Noble Foundation; Michael K. Udvardi, The Samuel Roberts Noble Foundation; Patrick Xuechun Zhao, The Samuel Roberts Noble Foundation

PDF file
10:50 AM
C25
GRNCASE: A High Performance Gene Regulatory Network Construction and Functional Module Discovery and Analysis Web Server
Jun Li, The Samuel Roberts Noble Foundation; Tingsong Liu, The Samuel Roberts Noble Foundation; Patrick Xuechun Zhao, The Samuel Roberts Noble Foundation

11:05 AM
C27
Preliminary Release of KBase Plant Services
Priya Ranjan, University of Tennessee, Knoxville; David Weston, Oak Ridge National Laboratory; Mustafa Syed, Oak Ridge National Laboratory; Guruprasad Kora, Oak Ridge National Laboratory; Miriam Land, Oak Ridge National Laboratory; Doreen Ware, Cold Spring Harbor Laboratory; Sergei Maslov, Brookhaven National Laboratory; Shinjae Yoo, Brookhaven National Laboratory; Dantong Yu, Brookhaven National Laboratory; Michael Schatz, Cold Spring Harbor Laboratory; James Gurtowski, Cold Spring Harbor Laboratory; Matt Titmus, Cold Spring Harbor Laboratory; Jer-Ming Chia, Cold Spring Harbor Labs; Sunita Kumari, Cold Spring Harbor Laboratory; Andrew Olson, Cold Spring Harbor Laboratory; Shiran Pasternak, Cold Spring Harbor Laboratory; Jim Thomason, Cold Spring Harbor Laboratory; Mark Gerstein, Yale University; Gang Fang, Yale University; Darryl Reeves, Yale University; Pamela Ronald, Joint BioEnergy Institute (JBEI); TaeYun Oh, University of California, Davis; Christopher Henry, Argonne National Laboratory; Samuel M. D. Seaver, Argonne National Laboratory; Adam Arkin, Lawrence Berkeley National Laboratory

PDF file
11:20 AM
C28
GnpIS Plant Information System : New Updates for NGS and meta-QTL Analysis data
Delphine Steinbach, INRA - URGI; Célia Michotey, INRA URGI; Nacer Mohellibi, INRA - URGI; Daphné Verdelet, INRA - URGI; Dorothee Valdenaire, INRA URGI; Erik Kimmel, INRA - URGI; Hadi Quesneville, INRA - URGI

PDF file
11:35 AM
C29
IWGSC Sequence Repository : Blast Your Favorite Gene Against the Wheat Survey Sequence
Michael Alaux, INRA - URGI; Françoise Alfama, INRA - URGI; Véronique Jamilloux, INRA - URGI; Raphael Flores, INRA - URGI; Daphné Verdelet, INRA - URGI; Aminah Keliet, INRA - URGI; Nacer Mohellibi, INRA - URGI; Sophie Durand, INRA - URGI; Claire Viseux, INRA - URGI; Delphine Steinbach, INRA - URGI; Hadi Quesneville, INRA - URGI

PDF file
11:50 AM
C30
VirtualPlant: A Software Platform for Translational Systems Biology Research
Manpreet S. Katari, New York University

PDF file
See more of: Computer Demonstrations
<< Previous Computer Demonstration | Next Computer Demonstration >>