P1022
GMOD in the Cloud and GMOD in a Box

Date: Monday, January 13, 2014
Room: Grand Exhibit Hall
Scott Cain , Ontario Institute for Cancer Research, Medina, OH
Robert Buels , Boyce Thompson Institute for Plant Research, Cambridge, MA
Stephen P. Ficklin , Washington State University, Pullman, WA
Ed Lee , Lawrence Berkeley National Laboratory, Berkeley, CA
Lacey-Anne Sanderson , University of Saskatchewan, Saskatoon, SK, Canada
Amelia Ireland , University of California, Berkeley, Oakland, CA
Lincoln Stein , Ontario Institute of Cancer Research, Toronto, ON, Canada
GMOD in the Cloud is a virtual server, available through the Amazon compute cloud, equipped with a suite of preconfigured GMOD components and GMOD in a Box is an identical implementation in a VirtualBox virtual machine. Both include a Chado database, GBrowse2, JBrowse, Tripal, and WebApollo. Users can clone the GMOD Amazon Machine Image (AMI) or download the VirtualBox implementation from the GMOD ftp site, and either way create their own server for storing data and making it available to the public or a select group of users. Making use of virtualization--hosting data and/or applications on existing networked computer systems--to give users access to preconfigured, extensible servers is an alternative to building and maintaining large computing infrastructure in-house. Potential applications of the GMOD images range from short term usage, such as during annotation jamborees, to the long term provision of access to genome data and applications to the community.