5
Genome Technology: Other Genome Methodology

Date: Monday, January 13, 2014
Time: 7:00 AM-10:00 PM
Room: Grand Exhibit Hall
P113
Simplifying Complex Genomes: Flow Sorting Single Chromosomes and Whole Genomes after Fluorescent in situ Hybridization in Suspension - FISHIS
Sergio Lucretti, ENEA - Italian Agency for New Technologies; Debora Giorgi, ENEA - Italian Agency for New Technologies; Anna Farina, ENEA - Italian Agency for New Technologies; Valentina Grosso, ENEA Casaccia Research Centre, Plant Genetics & Genomics

P114
Genome Mapping Assisted De Novo Sequencing : Goliath Helps David
Peter Verhasselt, VIB Nucleomics Core; Caroline Van Damme, VIB Nucleomics Core; Wouter Van Delm, VIB Nucleomics Core

P115
Laser Capture Microdissection and Whole Chromosome Amplification for Sequencing Large Genomes
Melissa Keinath, University of Kentucky; Jeramiah Smith, University of Kentucky; S. Randal Voss, University of Kentucky

P116
Evaluation of RainDrop™ Digital PCR System for Absolute Quantification of Low Levels of Genetically Engineered OXY235 Canola Samples
Tigst Demeke, Canadian Grain Commission; Ursla Fernanado, Canadian Grain Commission; Michelle Holigroski, Canadian Grain Commission; Janice Bamforth, Canadian Grain Commission; Sung-Jong Lee, Canadian Grain Commission

P117
Error Rate Comparisions on Benchtop Sequencers
Neelamegam Sivakumar, King Abdullah University of Science and Technology

P118
Technological Validation of Single Cell Expression Analysis
Clémence Genthon, INRA, UMR444 LGC - GeT-PlaGe Genomics Facility; Herve Acloque, INRA-GenPhySE; Pierre Osteil, INSERM - UMR846; Pierre Savatier, INSERM - UMR846; Diane Esquerré, INRA GeT-PlaGe Genomics Facility - GenPhySe; Olivier Bouchez, INRA, UMR1388 GenPhYSE - GeT-PlaGe Genomics Facility; Johanna Barbieri, INRA, UMR444 LGC - GeT-PlaGe Genomics Facility; Marie Vidal, INRA, UMR444 LGC - GeT-PlaGe Genomics Facility; Sophie Valiere, INRA, UMR444 LGC - GeT-PlaGe Genomics Facility; Frederic Escudie, INRA, UMR444 LGC - GeT-PlaGe Genomics Facility; Claire Kuchly, INRA, UMR444 LGC - GeT-PlaGe Genomics Facility; Gerald Salin, INRA, UMR444 LGC - GeT-PlaGe Genomics Facility; Celine Jeziorski, INRA, UMR444 LGC - GeT-PlaGe Genomics Facility; Emeline Lhuillier, INRA, UMR444 LGC - GeT-PlaGe Genomics Facility; David Rengel, INRA LIPM; Denis Milan, INRA, UMR444 LGC - GeT-PlaGe Genomics Facility; Cécile Donnadieu, INRA, UMR444 LGC - GeT-PlaGe Genomics Facility

P119
Genomic Prediction in 3-Line Layer Data Using Different Linear Methods
Mario P.L. Calus, Animal Breeding and Genomics Centre, Wageningen UR Livestock Research; Heyun Huang, Wageningen UR Livestock Research; Addie Vereijken, Hendrix Genetics; Jeroen Visscher, ISA, Institut de Sélection Animale; Jan ten Napel, Wageningen UR Livestock Research; Jack Windig, Wageningen UR Livestock Research

P120
TargetAmpTM: A Linear RNA Amplification System for Expression Arrays
Anupama Khanna, Epicentre (an IIllumina comany); Agnes Jancso Radek, Epicentre (an IIllumina comany); Jim Pease, Epicentre (an IIllumina comany)

P121
Haplotype Assembly Refinement & Improvement
Christian Olsen, Biomatters; Kashef Qaadri, Biomatters

P122
WebGIVI: A Website Visualization of Gene and iTerm
Liang Sun, University of Delaware; Carl J. Schmidt, University of Delaware; Vijay K. Shanker, University of Delaware

P123
Complex Combinatorial Effects of Seed Treatments, Genotypes and Environment Quantified through Digital Phenotyping
Emily Hatas, Keygene, Inc.; Gert-Jan Speckmann, KeyGene; Koen Huvenaars, KeyGene; Shital Dixit, KeyGene; Marco van Schriek, KeyGene

P124
A Method for Selectively Enriching Microbial and Organellar DNA from Contaminating Eukaryotic Host DNA
Eileen T. Dimalanta, New England Biolabs; George R Feehery, New England Biolabs; Erbay Yigit, New England Biolabs; Bradley W. Langhorst, New England Biolabs; Laurence Ettwiller, New England Biolabs; Victor T Schmidt, Marine Biological Laboratory; David Hernandez, New Mexico State University; Fiona J. Stewart, New England Biolabs; Joanna Bybee, New England Biolabs; Laurie Mazzola, New England Biolabs; Donovan Bailey, New Mexico State University; Linda Amaral-Zettler, Brown University; Theodore B. Davis, New England Biolabs; Sriharsa Pradhan, New England Biolabs

P125
Quantifying the Genetic Contribution of Donor Embryos in Chimaeric Animals Using Illumina Beadchips
Dianne Hyndman, AgResearch Limited; Fleur.C. Oback, AgResearch Limited; Paul J Fisher, AgResearch Limited; Christine Couldrey, AgResearch Limited; David N Wells, AgResearch Limited

P126
Development of a qRT&Allele Specific-PCR Assay to Study Allele Specific Expression: A Case Study of Genes Involved in Drought Stress Response in Sunflower Hybrids
Baptiste Mayjonade, Laboratoire des Interactions Plantes Micro-organismes (LIPM) - INRA/CNRS; Gwenaelle Marchand, INRA LIPM; Sebastien Carrere, INRA LIPM; Stephane Munos, Laboratoire des Interactions Plantes Micro-organismes (LIPM) - INRA/CNRS; David Rengel, INRA LIPM; Nicolas Blanchet, Laboratoire des Interactions Plantes Micro-organismes (LIPM) - INRA/CNRS; Marie-Claude Boniface, Laboratoire des Interactions Plantes Micro-organismes (LIPM) - INRA/CNRS; Didier Varès, INRA LIPM; Brigitte Mangin, INRA (UR875 BIA); Jérôme Gouzy, Laboratoire des Interactions Plantes Micro-organismes (LIPM) - INRA/CNRS; Patrick Vincourt, INRA LIPM; Nicolas Langlade, Laboratoire des Interactions Plantes Micro-organismes (LIPM) - INRA/CNRS

P127
Effect of Stool Transportation Conditions on Microbiota Diversity
Won-Sik KIM, Norgen Biotek Corp.

P1114
E. coli and Agrobacterium Non-Coding Regulatory RNA Discovery
Hyejin Cho, Iowa State University; Hui-Hsien Chou, Iowa State University

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