P0057
Genome Mapping, Tagging & Characterization: Fruit Species - Even

Date: Monday, January 12, 2015
Time: 10:00 AM-11:30 AM
Room:
P0872
VitisCyc: A Metabolic Pathway Knowledgebase for Grape (Vitis vinifera)
Sushma Naithani, Department of Botany & Plant Pathology, Oregon State University; Justin L. Elser, Department of Botany & Plant Pathology, Oregon State University; Eli Nathaniel Waddell, Oregon State University; Pankaj Jaiswal, Department of Botany & Plant Pathology, Oregon State University

P0874
High-Density SNP-Based Genetic Map for Identification of Fruit Quality-Related QTLs in Table Grape
Nilo Mejía, Instituto de Investigaciones Agropecuarias, Centro Regional La Platina; Nallatt Ocarez, Instituto de Investigaciones Agropecuarias, Centro Regional La Platina; Mauricio González, Instituto de Investigaciones Agropecuarias, Centro Regional La Platina; Bruno Defilippi, Instituto de Investigaciones Agropecuarias, Centro Regional La Platina; Eduardo Torres, Instituto de Investigaciones Agropecuarias, Centro Regional La Platina

P0876
Application of Genotyping-By-Sequencing for Selection of Locus-Specific BAC Clones to Construct Physical Maps and Identify Candidate Genes in Vitis
Jacquelyn Ann Lillis, USDA-ARS; Craig A. Ledbetter, Crop Diseases, Pests and Genetics Research Unit, USDA-ARS; Rajtilak Majumdar, USDA-ARS Grape Genetics Research Unit; Lance Cadle-Davidson, USDA-ARS Grape Genetics Research Unit

P0878
Exploring Quantitative Trait Loci for Anthocyanin Content in Interspecific Hybrid Grape (Vitis labruscana × Vitis vinifera)
Yusuke Ban, NARO Institute of Fruit Tree Science (NIFTS); Akifumi Azuma, NARO Institute of Fruit Tree Science (NIFTS); Nobuhito Mitani, NARO Institute of Fruit Tree Science (NIFTS); Takeshi Hayashi, NARO Agricultural Research Center (NARC); Akihiko Sato, NARO Institute of Fruit Tree Science (NIFTS); Atsushi Kono, NARO Institute of Fruit Tree Science (NIFTS); Shozo Kobayashi, NARO Institute of Fruit Tree Science (NIFTS)

P0882
Fast and Robust Generation of High-Resolution Genetic Maps in Grapevine Interspecific Hybrid Half-Sib Families Using the HetMappS Pipeline and R/QTL
Paola Barba, School of Integrative Plant Science, Cornell University; Katie Hyma, Genomic Diversity Facility, Cornell University; Minghui Wang, Bioinformatics Facility, Cornell University; Jason Londo, USDA-ARS Grape Genetics Research Unit; Charlotte Acharya, Cornell University; Sharon E. Mitchell, Cornell University; Qi Sun, Institute for Genomic Diversity, Cornell University; Bruce Reisch, School of Integrative Plant Science, Cornell University; Lance Cadle-Davidson, USDA-ARS Grape Genetics Research Unit

P0884
Comparative Mapping of the Muscadine Grape (Vitis rotundifolia) and the European Bunch Grape (V. vinifera) Shows a High Level of Synteny Between the Two Species
Chris Owens, USDA-ARS

P0886
Analysis of Xylem Tissue and Xylem Sap Proteome Reveal Disease Tolerance Mechanisms Among Grape Species
Varshini Sridhar, Florida A&M University; Ramesh Katam, Florida A&M University; Devaiah M. Kambiranda, Florida A&M University; Joseph Bundy, Florida State University; Sydney Lyda, Florida A&M University; Kundai Chibanguza, Florida A&M University; Shelletta Tilghman, Florida A&M University

P0888
How to Use GDR, the Genome Database for Rosaceae
Sook Jung, Washington State University; Stephen P. Ficklin, Washington State University; Taein Lee, Washington State University; Chun-Huai Cheng, Washington State University; Anna Blenda, Genetics and Biochemistry, Clemson University; Jing Yu, Washington State University; Ping Zheng, Washington State University; Sushan Ru, Washington State University; Cameron Peace, Washington State University; Katherine M. Evans, Washington State University; Nnadozie Oraguzie, Washington State University; Lisa DeVetter, Washington State University; Albert G. Abbott, Clemson University; Ksenija Gasic, Clemson University; Mercy Olmstead, University of Florida; Dorrie Main, Washington State University

P0890
Developing a Genetic Map for Tetraploid Roses Using Genotyping-By-Sequencing
Travis W. Banks, Vineland Research and Innovation Centre; Michael Pautler, Vineland Research and Innovation Centre; Rumen Conev, Vineland Research and Innovation Centre; Daryl J. Somers, Vineland Research and Innovation Centre

P0892
Candidate Gene Expression Profiling Reveals a Time Specific Activation during Fruit Development and Ripening in Apple
Alice Tadiello, Fondazione E. Mach; Nicola Busatto, University of Bologna; Brian Farneti, University of Bologna; Riccardo Velasco, Fondazione E. Mach; Guglielmo Costa, University of Bologna; Fabrizio Costa, Fondazione E. Mach

P0894
Simulation of Genetic Gain from Marker-Assisted Seedling Selection for Quantitative Trait Improvement in Rosaceae Tree Fruit
Sushan Ru, Washington State University; Craig Hardner, University of Queensland; Patrick A. Carter, Washington State University; Katherine M. Evans, Washington State University; Dorrie Main, Washington State University; Cameron Peace, Washington State University

P0896
Saturated Linkage Map Construction in Hongro X Alps Otome Pseudo Test Cross Population Using Genomics
YoungKeun Jun, Kyungpook National University; Seung Hyun Ban, Kyungpook National University; Cheol Choi, Kyungpook National University

P0898
cis and trans eQTLs Reveal the Location of Major Gene Expression Switches in Apple Rootstocks
Gennaro Fazio, USDA-ARS; Philip Jensen, Department of Plant Pathology; Angela M. Baldo, USDA ARS DBNRRC; Timothy McNellis, Department of Plant Pathology and Environmental Microbiology

P0900
Fire Blight Resistant Pre-Breeding Apple Genotypes Developed Using the Early Flowering Approach
Melanie Jänsch, Institute for Plant Production Sciences (IPS), Agroscope; Henryk Flachowsky, Julius Kühn-Institut, Institute for Breeding Research on Fruit Crops; Viola M. Hanke, Julius Kühn-Institut, Institute for Breeding Research on Fruit Crops; Andrea Patocchi, Institute for Plant Production Sciences (IPS), Agroscope

P0902
Genome-Wide Transcriptomic Analysis Correlated with Superficial Scald Development in Granny Smith Apples (Malus X Domestica Borkh)
Nicola Busatto, University of Bologna; Brian Farneti, University of Bologna; Alice Tadiello, Fondazione E. Mach; Massimo Delledonne, University of Verona; Guglielmo Costa, University of Bologna; Riccardo Velasco, Fondazione E. Mach; Fabrizio Costa, Fondazione E. Mach

P0904
Development of High-Throughput Indel Marker Based on Next Generation Sequencing in Korean Pears (Pyrus spp.)
Jungyeon Won, Chungbuk National University; Youngjae Oh, Chungbuk National University; Seolah Kim, Chungbuk National University; Hyunsuk Shin, Chungbuk National University; Sewon Oh, Chungbuk National University; Yoon-Kyeong Kim, National Institute of Horticultural & Herbal Science; Daeil Kim, Chungbuk National University

P0906
Classification of Korean Native Pear By Using a Standard Set of Simple Sequence Repeat Marker Alleles
Seolah Kim, Chungbuk National University; Youngjae Oh, Chungbuk National University; Hyunsuk Shin, Chungbuk National University; Jungyeon Won, Chungbuk National University; Sewon Oh, Chungbuk National University; Yoon-Kyeong Kim, National Institute of Horticultural & Herbal Science; Nahla Bassil, USDA/ARS, NCGR; Daeil Kim, Chungbuk National University

P0908
Genome-Wide Analysis of Monosaccharide Transporter (MST) Family Genes in Pear
Jiaming Li, Nanjing Agricultural University; Shaoling Zhang, Nanjing Agricultural University; Jun Wu, Nanjing Agricultural University

P0910
Genome-Wide Survey, Identification and Evolution Analysis of Aldo-Keto Reductase (AKR) Genes in Pear and Other Members in Rosaceae
Lei-Ting Li, Nanjing Agricultural University; Jun Wu, Nanjing Agricultural University; Xin Qiao, Nanjing Agricultural University; Shaoling Zhang, Nanjing Agricultural University

P0914
Association Mapping Analysis for Chemical and Physical Traits in Almond
Carolina Font i Forcada, Genome Center, University of California; Rafael Socias i Company, CITA Aragon; Angel Fernandez i Marti, Genome Center, University of California

P0916
Genetic Dissection of Complex Fruit Quantitative Traits in Peach Progenies
Igor Pacheco Cruz, UNIMI, Dipartimento di Scienze Agrarie e Ambientali (DiSAA); Angelo Ciacciulli, UNIMI, Dipartimento di Scienze Agrarie e Ambientali (DiSAA); Cassia Da Silva-Linge, UNIMI, Dipartimento di Scienze Agrarie e Ambientali (DiSAA); Stefano Gattolin, Parco Tecnologico Padano; Cinzia Colombi, Parco Tecnologico Padano; Stefano Foschi, CRPV soc. coop.; Martina Lama, ASTRA Innovazione e Sviluppo S.R.L.; Laura Rossini, Universty of Milan - DiSAA; Daniele Bassi, University of Milano

P0918
Candidate Genes for Metabolite Profiling of Strawberry NIL Collection
Amparo Monfort, IRTA, Centre for Research in Agricultural Genomics CSIC-IRTA-UAB-UB; Maria Urrutia, Center for Resarch in Agricultural Genomics CSIC-IRTA-UAB-UB; Wilfried Schwab, Technische Universität München; Thomas Hoffmann, Technische Universität München,

P0920
Diversity Analysis and Genetic Mapping in Octoploid Strawberry (Strawberry × ananassa) Based on DArT Marker Platforms
José F. Sánchez-Sevilla, IFAPA - Breeding and Biotechnology; Aniko Horvath, INRA; Andrzej Kilian, Diversity Arrays Technology Pty Ltd (DArT PL); Béatrice Denoyes, INRA UMR 1332 - FRANCE; Iraida Amaya, IFAPA - Breeding and Biotechnology

P0922
Annotation of Tissue-Specific Transcriptome Data from Rabbiteye Blueberry (Vaccinium virgatum)
Timothy A. Rinehart, USDA-ARS Southern Horticultural Laboratory; Ann Loraine, University of North Carolina Charlotte

P0924
Meta-Analysis and Gene Co-Expression Network Analysis of Citrus-HLB Transcriptome Datasets Identify Candidate Citrus Genes for Engineering HLB Resistance
Nidhi Rawat, University of Florida; Zhanao Deng, University of Florida; Fred G. Gmitter, University of Florida, IFAS-CREC; Dongliang Du, University of Florida, IFAS-CREC

P0926
Full-Length LTR Retrotransposons in the Genome of Citrus × Clementina
Dongliang Du, University of Florida, IFAS-CREC; Xiaoyun Du, University of Florida, IFAS-CREC; Yanbo Wang, University of Florida, IFAS-CREC; Fred G. Gmitter, University of Florida, IFAS-CREC

P0928
Abiotic Stress and Hormonal Responses of a Promoter of Citrus Carotenoid Isomerase Gene in Transgenic Arabidopsis
In-Jung Kim, Faculty of Biotechnology, Jeju National University; Chang-Ho Eun, Subtropical Horticulture Research Institute, Jeju National University; Seong-U Kim, Faculty of Biotechnology, Jeju National University

P0930
A Dexamethasone-Inducible Gene Expression System Is Active in Citrus Plant
Pascale Rossignol, Current Address J. Craig Venter Institute; Vladimir Orbovic, Citrus Research and Education Center; Tengbo Huang, Yale University; Christopher L. Dupont, J. Craig Venter Institute; Vivian F. Irish, Yale University

P0934
Identification of Homologous Chromosomes Revealed Evolution at Single-Copy Gene Loci in Cucumis ×hytivus Chen and Kirkbride, a Nascent Allotetraploid Cucumis Species
Yunzhu Wang, Nanjing Agricultural University

P0936
Analysis of Differentially Expressed Genes in Cucumber Interspecific Introgression Line with Resistance to Downy Mildew
Chunyan Cheng, Nanjing Agricultural University; Xin Pang, Nanjing Agricultural University; Xuejiao Liu, Nanjing Agricultural University; Ji Li, Nanjing Agricultural University; Qunfeng Lou, Nanjing Agricultural University; Jinfeng Chen, Nanjing Agricultural University

P0938
Efficient Genetic Mapping and QTL Analysis in Watermelon
Sun-Ju Rhee, Chung-Ang University; Yun-Jung Jang, Chung-Ang University; Bal-Kum Han, Dept of Integrative Plant Science, Chung-Ang University; Yeon-Ju Koh, Chung-Ang University; Gung-Pyo Lee, Dept of Integrative Plant Science, Chung-Ang University

P0940
High Quality Plant Genome Assembly Using PacBio Long Read Whole Genome Sequencing and Short Read Whole Genome Profiling (WGPTM) - Melon
Michiel de Both, KeyGene; Nathalie J. van Orsouw, KeyGene; Jan van Oeveren, KeyGene; Jifeng Tang, KeyGene; Dennis Woltinge, KeyGene; Rui Peng Wang, KeyGene; Erwin Datema, KeyGene; Antoine Janssen, KeyGene; Edwin van der Vossen, Keygene; Michiel van Eijk, KeyGene

P0942
Banana Genome Contributes to Understand Grass Chromosome Number Reduction and Genome Repatterning Mechanism
Xiyin Wang, Plant Genome Mapping Laboratory, University of Georgia

P0944
Managing Banana Genetic Resources and Genomic Information with the Triplet Drupal/Tripal/Chado
Valentin Guignon, Bioversity International, Commodity Systems & Genetic Resources; Max Ruas, Bioversity International; Gaëtan Droc, CIRAD, UMR AGAP; Alexis Dereeper, IRD, UMR RPB; Julie Sardos, Bioversity International; Yann Hueber, Bioversity International; Jean-François Dufayard, CIRAD - UMR AGAP; Nicolas Roux, Bioversity International; Mathieu Rouard, Bioversity International

P0946
Identification of Genomic Region Associated with Female Date Palm through SCAR Markers
Madhia Habib, CABB, University of Agriculture Faisalabad; Faisal Saeed Awan, University of Agriculture Faisalabad; Bushra Sadia, CABB, University of Agriculture Faisalabad; Muhammad Anjum Zia, University of Agriculture Faisalabad; Jasia Anjum, CABB, University of Agriculture Faisalabad; Azeem Iqbal Khan, University of Agriculture Faisalabad

P0948
Impact of Transposable Elements on the Evolution of Coffea arabica (Rubiaceae)
Elaine S. Dias, UNESP - Universidade Estatual Paulista; Serge Hamon, IRD UMR DIADE; Perla Hamon, IRD UMR DIADE; Romain Guyot, IRD UMR DIADE; Alexandre de Kochko, IRD UMR DIADE; Claudia Carareto, UNESP - Universidade Estatual Paulista

P1206
Genomic Profiling of Plum Prunus domestica L. Germplasm using Genotyping-by-Sequencing
Tatyana Zhebentyayeva, Clemson University Genomics & Computational Biology Laboratory; Christopher A. Saski, Clemson University Genomics & Computational Biology Laboratory; Ted DeJong, University of California; Michael Ravelonandro, INRA- UMR Fruit Biology and Pathology; Ralph Scorza, USDA-ARS Appalachian Fruit Research Station; Ann Callahan, USDA-ARS Appalachian Fruit Research Station; Christopher Dardick, USDA-ARS Appalachian Fruit Research Station

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