FragariaCyc: A Metabolic Pathway Network for Diploid Strawberry F. vesca

FragariaCyc is a strawberry-specific cellular metabolic network based on the annotated genome sequence of Fragaria vesca L. ssp. Vesca, accession Hawaii 4 (available online at http://pathways.cgrb.oregonstate.edu/pgdb/fragariacyc.shtml). FragariaCyc, built using BioCyc platform, harbors 66 super pathways, 488 unique pathways, 2348 metabolic reactions, 3507 enzymes, and 2134 compounds. Researchers can search and browse FragariaCyc for its various entities; compare pathways across various plant metabolic networks that available from our website; and analyze their own data using OMICs-viewer tool. We view FragariaCyc as a resource for the community of researchers working with strawberry and related fruit crops that can help in understanding the overall strawberry metabolism and how it is regulated during plant’s development, and in response to biotic and abiotic stresses. We look forward to collaborating with strawberry researchers in developing a community based curation model for FragariaCyc.