3162Sequencing Complex Genomes
This workshop reviews progress in sequencing complex genomes. Advances in technology and examples of applications to complex genome sequencing are presented.
Date: Sunday, January 10, 2016
Time: 4:00 PM-6:10 PM
Room: Golden Ballroom
4:00 PM
IWGSC Whole Genome Shotgun Sequencing of Chinese Spring to Complement the High Quality BAC-Based Sequencing of All 21 Wheat Chromosomes
Curtis J Pozniak, University of Saskatchewan;
Andrew G. Sharpe, National Research Council Canada / Global Institute for Food Security (U of S);
Jesse Poland, Kansas State University;
Assaf Distelfeld, Tel Aviv University;
Jan Dvorak, Department of Plant Sciences, University of California, Davis;
Ming-Cheng Luo, Department of Plant Sciences, UC Davis;
Dr. Gil Ronen, NRGene;
Mike Thompson, Illumina, Inc;
Kellye Eversole, Eversole Associates;
Jane Rogers, International Wheat Genome Sequencing Consortium;
The International Wheat Genome Sequencing Consortium, IWGSC;
Nils Stein, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK)
4:20 PM
High Quality Draft Genomes of Medicago truncatula & Gossypium herbaceum using NGS, Dovetail & BioNano Technologies
Thiruvarangan Ramaraj, National Center for Genome Resources (NCGR);
Nicolas Devitt, National Center for Genome Resources (NCGR);
Diego A. Fajardo, National Center for Genome Resources (NCGR);
Karen M. Moll, National Center for Genome Resources (NCGR);
Aaron Sharp, Brigham Young University;
Kevin AT Silverstein, Supercomputing Institute, University of Minnesota;
Jason R. Miller, J. Craig Venter Institute;
Josh Udall, Brigham Young University;
Nevin D. Young, Department of Plant Pathology, University of Minnesota;
Joann Mudge, National Center for Genome Resources (NCGR)
4:40 PM
Spotting the Difference: Comparing the Genome of Corymbia with its Larger Cousin Eucalyptus grandis
Mervyn Shepherd, Southern Cross University;
Kerrie W. Barry, DOE Joint Genome Institute;
Abdul Baten, Southern Cross Plant Science, Southern Cross University;
Jakob Butler, University of Tasmania;
Jules S. Freeman, School of Plant Science and NCFFI, University of Tasmania;
Agnelo Furtado, University of Queensland;
Dario Grattapaglia, Plant Genetics Lab - EMBRAPA Genetic Resources & Biotechnology;
Adam Healey, University of Queensland;
Robert J. Henry, University of Queensland/QAAFI;
Graham J King, Southern Cross Plant Science, Southern Cross University;
David Lee, University of Sunshine Coast;
Brad M. Potts, School of Plant Science and NCFFI, University of Tasmania;
Jeremy Schmutz, Hudson Alpha;
Orzenil B. da Silva Junior, EMBRAPA Genetic Resources and Biotechnology;
Blake Simmons, Joint Bioenergy Instutute;
Rene Vaillancourt, University of Tasmania
5:00 PM
Drafting the Kensington Pride Mango Genome
Natalie Dillon, Queensland Department of Agriculture and Fisheries;
David Innes, Queensland Department of Agriculture and Fisheries;
Yao Ming, Beijing Genome Institute;
Xiaodong Fang, BGI-Shenzhen;
Xuan Li, Beijing Genome Institute;
Xiaolei Gao, Beijing Genome Institute;
Ru Lin Zhan, Subtropical Crops Research Institute;
Wu HongXia, Subtropical Crops Research Institute;
Prasad Bajaj, ICRISAT;
Ian Bally, Queensland Department of Agriculture and Fisheries;
Alok Kumar, Horticulture Innovation Australia;
Rajeev K Varshney, ICRISAT
