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Bioinformatics: Algorithms

P0275
Cogent: Reconstructing the Coding Genome from Full-Length Transcriptome Sequences
Elizabeth Tseng, Pacific Biosciences; Xiang Qin, Baylor College of Medicine; Muthuswamy Raveendran, Baylor College of Medicine; Yue Liu, Baylor College of Medicine; Shwetha C. Murali, Baylor College of Medicine; Yi Han, Baylor College of Medicine; Kim C. Worley, Baylor College of Medicine; Jeffrey Rogers, Baylor College of Medicine; Ting Hon, Pacific Biosciences; Tyson A. Clark, Pacific Biosciences; Nathan Tublitz, University of Oregon

P0276
GeneMark Family of Gene Prediction Tools for Prokaryotic and Eukaryotic Genomes
Mark Borodovsky, Georgia Institute of Technology; Shiyuyun Tang, Georgia Institute of Technology; Alexandre Lomsadze, Georgia Institute of Technology

P0277
Bagging Strong Bayesian Learners for Genomic Prediction
Alencar Xavier, Purdue University; William Muir, Purdue University; Katy Martin Rainey, Purdue University

P0278
Towards Building Complete Genome Assemblies using BioNano Next-Generation Mapping Technology
Andy Wing Chun Pang, BioNano Genomics; Thomas Anantharaman, BioNano Genomics; Palak Sheth, BioNano Genomics; Xiang Zhou, BioNano Genomics; Jian Wang, BioNano Genomics; Joyce Lee, BioNano Genomics; Alex Hastie, BioNano Genomics; Zeljko J. Dzakula, BioNano Genomics; Han Cao, BioNano Genomics

P0279
A Survey of the SMR Gene Family in the Plant Kingdom, Using a Motif Oriented Search Tool
Matthew C. Johnson, Louisiana State University; Dong-Ha Oh, Louisiana State University; John Larkin, Louisiana State University; Maheshi Dassanayake, Louisiana State University

P0280
A New Approach for Increased Participation of Orthologs for Evolutionary Studies
Kyu-Won Kim, Kongju National University; Il-Pyung Ahn, Rural Development Administration; Tae-Sung Kim, Kongju National University; Min-Young Yoon, Kongju National University; Qiang He, Kongju National University; Eun-Beom Heo, Kongju National University; Yong-Jin Park, Kongju National University

P0281
Pangenomics for Eukaryotes
Sandra Smit, Wageningen University; Siavash Sheikhizadeh Anari, Wageningen University; M. Eric Schranz, Wageningen University; Dick de Ridder, Wageningen University

P0282
Leveraging the Marine Microbial Eukaryote Transcriptome Sequencing Project for Algal Genome Annotation
Richard D Hayes, DOE Joint Genome Institute; Andrew E. Allen, J. Craig Venter Institute; Jeremy Schmutz, HudsonAlpha Institute for Biotechnology; David M. Goodstein, DOE Joint Genome Institute; Daniel S. Rokhsar, DOE Joint Genome Institute

P0283
AHRD: Automated Assignment of Human Readable Descriptions and Gene Ontology terms
Florian Boecker, INRES Crop Bioinformatics, University of Bonn; Asis Hallab, INRES Crop Bioinformatics, University of Bonn; Kathrin Klee, Life and Medical Sciences Center, University of Bonn; Heiko Schoof, INRES Crop Bioinformatics, University of Bonn

P0284
Development of a Candidate Gene Selection Model Based on Multiple Species and Data Types
Brian Sayre, Virginia State University

P0285
Redefining the Structural Motifs that Determine RNA Binding and RNA Editing by Pentatricopeptide Repeat Proteins in Land Plants
Shifeng Cheng, The University of HongKong

P1272
Optimizations of Physical Genome Map Contiguity by In Silico Ligation
Palak Sheth, BioNano Genomics

P1299
The Systems Toxicology Challenge: Omics Data to Predict Exposure Response and Mechanisms of Toxicity
Stéphanie Boué, Philip Morris International R&D, PMP SA; Carine Poussin, Philip Morris International R&D, PMP SA; Vincenzo Belcastro, Philip Morris International R&D, PMP SA; Florian Martin, Philip Morris International R&D, PMP SA; Alain Sewer, Philip Morris International R&D, PMP SA; Björn Titz, Philip Morris International R&D, PMP SA; Nikolai V. Ivanov, Philip Morris International R&D, PMP SA; Manuel C Peitsch, Philip Morris International R&D, PMP SA; Julia Höng, Philip Morris International R&D, PMP SA

P1300
Sequencing the Solanum pennellii genome and algorithms inspired thereby
Anthony Bolger, RWTH Aachen

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