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Genomics-Assisted Breeding

About the workshop: In recent years, a truly impressive number of advances in genetics and genomics have greatly enhanced our understanding of structural and functional aspects of plant genomes. The complete genome sequences have become available for many crop species now. Due to advances in next generation sequencing technologies, it is possible to re-sequence mapping populations as well as germplasm collections in large numbers. In addition to routinely used linkage mapping and marker-assisted selection (MAS) approaches, several novel genetic and genomics tools/approaches such as genome-wide association studies (GWAS), marker-assisted recurrent selection (MARS), genomic selection (GS), functional genomics, etc. offer the possibilities to examine and utilize the structural as well as functional genetic variation in crop breeding. Holistic approach of enhancing the prediction of the phenotype from a genotype using genomics tools/approaches has been termed as 'genomics assisted breeding' (GAB) (Trends Plant Sci 10: 621 630). In fact, genomics assisted breeding has already shown its potential for crop improvement in several cereal species (Trends Biotech 24:490-499) and also in few legume species (Plant Breeding Rev 33:257-304). A critical assessment of the status and availability of genomic resources and genomics research in crop plant species and devising the strategies and approaches for effectively exploiting genomics research for crop improvement is the need of the hour (Nature Biotechnology 30:1172–1176). Genomics specialists having extensive experience in applying genomics in breeding from both public and private sectors share their experience and propose novel ideas in this workshop to use GAB in an efficient manner.
Date: Tuesday, January 17, 2017
Time: 10:30 AM-12:40 PM
Room: Town and Country
Organizer:
Rajeev K Varshney
10:30 AM
Welcome & Introduction
Rajeev K Varshney, ICRISAT

10:35 AM
the Choreography of Drought Tolerance in Barley
Kerstin Neumann, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK); Dhanagond Sidram, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK); Yusheng Zhao, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK); Guozheng, Liu, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK); Benjamin Kilian, Global Crop Diversity Trust (GCDT); Jochen Christoph Reif, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK); Andreas Graner, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK)

10:55 AM
Connecting the Genome and Phenome to Develop Stress-Tolerant Maize Cultivars
Shawn Kaeppler, Department of Agronomy and Wisconsin Crop Innovation Center; Jonathon Lynch, Penn State University; Kathleen Brown, Penn State University; Patompong Sangwilai, Mahidol University; Xia Zhang, Biotechnology Research Institute, Chinese Academy of Agricultural Sciences (BRI,CAAS)

11:35 AM
Genome-Based Gene Pool Expansion and Heterotic Haplotype Capture in Rapeseed
Rod Snowdon, Justus Liebig University; Amine Abbadi, NPZ Innovation GmbH; Gunhild Leckband, NPZ Innovation GmbH

11:55 AM
12:35 PM
Summary and Wrap-up
Rajeev K Varshney, ICRISAT

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