P0076Bioinformatics: Databases - Odd
Date: Monday, January 12, 2015
Time: 3:00 PM-4:30 PM
Room:
dbSNP and dbVar: NCBI Databases of Simple and Structural Variations
Lon Phan, NIH/NLM/NCBI;
Hua Zhang, NIH/NLM/NCBI;
Mike Kholodov, NIH/NLM/NCBI;
David Shao, NIH/NLM/NCBI;
Rama Maiti, NIH/NLM/NCBI;
Eugene Shekhtman, NIH/NLM/NCBI;
Juliana Sampson, NIH/NLM/NCBI;
Qiang Wang, NIH/NLM/NCBI;
John Lopez, NIH/NLM/NCBI;
Tim Hefferon, NIH/NLM/NCBI;
John Garner, NIH/NLM/NCBI;
Ming Ward, NIH/NLM/NCBI
Genotype Investigator for Genome Wide Analysis (GIGwA)
Pierre Larmande, IRD, UMR DIADE, Institut de Biologie Computationnelle;
Guilhem Sempéré, CIRAD, UMR Intertryp;
Florian Philippe, IRD - UMR DIADE;
Alexis Dereeper, IRD, UMR RPB;
Manuel Ruiz, CIRAD, UMR AGAP, Institut de Biologie Computationnelle;
Gautier Sarah, INRA - UMR AGAP
Leveraging iPlant Cyberinfrastructure for a New Data-Driven Research Community
James Carson, Texas Advances Computing Center, University of Texas;
Eric Dawson, Texas Advances Computing Center, University of Texas;
James E. Koltes, Department of Animal Science, Iowa State University;
Eric Fritz-Waters, Department of Animal Science, Iowa State University;
James M. Reecy, Iowa State University;
Matt Vaughn, Texas Advanced Computing Center
Annotation of Laurasiatheria Genomes By National Center for Biotechnology Information (NCBI)
Shashikant Pujar, NCBI, National Institutes of Health;
Bhanu Rajput, NCBI, National Institutes of Health;
Francoise Thibaud-Nissen, National Center for Biotechnology Information (NCBI/NLM/NIH);
Terence D. Murphy, National Center for Biotechnology Information, NLM, NIH;
Paul Kitts, NIH/NLM/NCBI;
Kim D. Pruitt, National Center for Biotechnology Information (NCBI/NLM/NIH)
An Integrated Annotation Data Warehouse at the Hymenoptera Genome Database
Aditi Tayal, Division of Animal Sciences, University of Missouri;
Deepak R. Unni, Division of Animal Sciences, University of Missouri;
Colin M. Diesh, Division of Animal Sciences, University of Missouri;
Darren E. Hagen, Division of Animal Sciences, University of Missouri;
Christine G. Elsik, Division of Animal Sciences, University of Missouri
Browsing and Comparing Genomes Using the Gramene/Ensembl Plants Browser
Joshua Stein, Cold Spring Harbor Laboratory;
Sharon Wei, Cold Spring Harbor Laboratory;
Marcela Karey Tello-Ruiz, Cold Spring Harbor Laboratory;
Andrew Olson, Cold Spring Harbor Laboratory;
Sunita Kumari, Cold Spring Harbor Laboratory;
Jerry Lu, Cold Spring Harbor Laboratory;
Joseph Mulvaney, Cold Spring Harbor Laboratory;
Jim Thomason, Cold Spring Harbor Laboratory;
Ken Youens-Clark, Cold Spring Harbor Laboratory;
Dan Bolser, EMBL - The European Bioinformatics Institute;
Arnaud Kerhornou, EMBL - The European Bioinformatics Institute;
Paul J. Kersey, EMBL - The European Bioinformatics Institute;
Doreen Ware, Cold Spring Harbor Laboratory/USDA-ARS
An Ontology Approach to Comparative Phenomics in the Plants: Arabidopsis, Tomato, Maize, Rice, Soybean and Medicago
Lisa Harper, USDA ARS;
Anika Oellrich, Wellcome Trust Sanger Institute;
Ramona Walls, The iPlant Collaborative;
Ethalinda Cannon, Iowa State University;
Steven B. Cannon, USDA-ARS-CICGRU;
Laurel Cooper, Department of Botany & Plant Pathology, Oregon State University;
Jack Gardiner, Iowa State University;
Georgios Gkoutos, Computer Science Department, Aberystwyth University;
Mingze He, Bioinformatics and Computational Biology Program, Iowa State University;
Robert Hoehndorf, King Abdullah University of Science & Technology;
Pankaj Jaiswal, Department of Botany & Plant Pathology, Oregon State University;
Johnny Lloyd, Michigan State University;
Scott R. Kalberer, USDA-ARS-CICGRU;
David Meinke, Oklahoma State University;
Naama Menda, Boyce Thompson Institute for Plant Research;
Laura Moore, Department of Botany and Plant Pathology, Oregon State University;
Rex Nelson, USDA-ARS-CICGRU;
Anuradha Pujar, Cornell University;
Carolyn J. Lawrence-Dill, Department of Genetics, Development and Cell Biology and Department of Agronomy,Iowa State University;
Eva Huala, Phoenix Bioinformatics
Data Mining in Plant Omics Data Center Suggests Conserved Gene Expression Networks of Molecular Chaperone and Protein Disulfide Isomerase Genes in Different Organs
Toru Kudo, School of Agri., Meiji University;
Tomoyuki Takano, School of Agri., Meiji University;
Shin Terashima, School of Agri., Meiji University;
Masaaki Kobayashi, School of Agri., Meiji University;
Maasa Kanno, School of Agri., Meiji University;
Kyoko Morimoto, School of Agri., Meiji University;
Hiromi Kanegae, School of Agri., Meiji University;
Soichi Ozaki, School of Agri., Meiji University;
Yohei Sasaki, School of Agri., Meiji University;
Misa Saito, School of Agri., Meiji University, CREST, JST, Kawasaki;
Satomi Asano, School of Agri., Meiji University;
Koji Yokoyama, School of Agri., Meiji University;
Koichiro Aya, Bioscience and Biotechnology Center, Nagoya University;
Keita Suwabe, Mie University;
Go Suzuki, Osaka Kyoiku University;
Masao Watanabe, Tohoku University/Life Sciences;
Makoto Matsuoka, Bioscience and Biotechnology Center, Nagoya University;
Hajime Ohyanagi, School of Agri., Meiji University;
Kentaro Yano, School of Agri., Meiji University
KDDart Platform for Data Integration in Pre-Breeding, Breeding and Ecology
Grzegorz Uszynski, Diversity Arrays Technology Pty Ltd (DArT PL);
Puthick Hok, Diversity Arrays Technology Pty Ltd (DArT PL);
Brian Pierce, Diversity Arrays Technology Pty Ltd (DArT PL);
David Hunter, Diversity Arrays Technology Pty Ltd (DArT PL);
Aneal Chandra, Diversity Arrays Technology Pty Ltd (DArT PL);
Stanley Wijoyo, Diversity Arrays Technology Pty Ltd (DArT PL);
Manil Chaudhary, Diversity Arrays Technology Pty Ltd (DArT PL);
Brad Lanham, Diversity Arrays Technology Pty Ltd (DArT PL);
Frank Detering, Diversity Arrays Technology Pty Ltd (DArT PL);
Krzysztof Kurczynski, Diversity Arrays Technology Pty Ltd (DArT PL);
Andrzej Kilian, Diversity Arrays Technology Pty Ltd (DArT PL)
DNA Polymorphism Database from New-Generation Sequence Read Archive and Analytical Workflow
Takako Mochizuki, Genome Informatics Laboratory, NIG, ROIS;
Yasuhiro Tanizawa, Genome Informatics Laboratory, NIG, ROIS;
Takatomo Fujisawa, Genome Informatics Laboratory, NIG, ROIS;
Naruo Nikoh, Liberal Arts, OUJ;
Atsushi Toyoda, Comparative Genomics laboratory, NIG, ROIS;
Asao Fujiyama, Comparative Genomics laboratory, NIG, ROIS;
Nori Kurata, Plant Genetics Laboratory, National Institue of Genetics;
Hideki Nagasaki, Genome Informatics Laboratory, NIG, ROIS;
Tokurou Shimizu, NARO Institute of Fruit Tree Science;
Eli Kaminuma, Genome Informatics Laboratory, NIG, ROIS;
Yasukazu Nakamura, Genome Informatics Laboratory, NIG, ROIS
CyMSatDB: The Globe Artichoke (Cynara cardunculus var. scolymus) Microsatellite Database
Ezio Portis, DISAFA - Plant Genetics and Breeding, University of Torino;
Flavio Portis, Yebokey – User Experience Design and Web Development;
Luisa Valente, Yebokey – User Experience Design and Web Development;
Silvia Gianoglio, DISAFA - Plant Genetics and Breeding, University of Torino;
Fabio Cericola, Molecular Biology and Genetics, Aarhus University;
Sergio Lanteri, DISAFA - Plant Genetics and Breeding, University of Torino;
Alberto Acquadro, DISAFA - Plant Genetics and Breeding, University of Torino
